ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YEAH_SALTY (Q8ZPW3) UPF0229 protein yeaH 30 1.5
2K1688_MOUSE (P59281) Protein KIAA1688 29 2.5
3ZDH20_HUMAN (Q5W0Z9) Probable palmitoyltransferase ZDHHC20 (EC 2... 28 4.3
4DHE2_ACHKL (P41755) NAD-specific glutamate dehydrogenase (EC 1.4... 28 4.3
5K1688_HUMAN (Q9C0H5) Protein KIAA1688 28 5.6
6PANB_PSEFL (Q9ZEP8) 3-methyl-2-oxobutanoate hydroxymethyltransfe... 28 7.3
7YEAH_SALTI (Q8Z6E7) UPF0229 protein yeaH 28 7.3
8YEAH_ECOLI (P76235) UPF0229 protein yeaH 27 9.5
9YEAH_ECO57 (Q8XDT8) UPF0229 protein yeaH 27 9.5
10Y986_VIBPA (Q87R12) UPF0229 protein VP0986 27 9.5

>YEAH_SALTY (Q8ZPW3) UPF0229 protein yeaH|
          Length = 428

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 115 KQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTL 225
           K+ Y  G   +Y    S+ DNW+ ++ LC+  L K L
Sbjct: 330 KERYDPGQWNIYAAQASDGDNWADDSPLCHEILAKKL 366



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>K1688_MOUSE (P59281) Protein KIAA1688|
          Length = 1107

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 147 IYRDYKRAGQLVQQRASMLRFSTQN 221
           +YRDY   GQL+  R S LR+++ N
Sbjct: 181 VYRDYSADGQLLHYRTSSLRWNSGN 205



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>ZDH20_HUMAN (Q5W0Z9) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 20) (DHHC-20)
          Length = 365

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 58  NYRYLLLFL*VMNCSGLHAKQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTLHF 231
           NY++ LLFL       L    T  E FI+ +   T+EL +  +  H+ ++F +  + F
Sbjct: 167 NYKFFLLFLLYSLLYCLFVAATVLEYFIKFW---TNELTDTRAKFHVLFLFFVSAMFF 221



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>DHE2_ACHKL (P41755) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)|
           (NAD-GDH)
          Length = 1063

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = +3

Query: 6   NPAVQICIEVKKTEAQLELQVSLIVPVSNELFRSACQADLP*RVYSTIYRDYKRAGQLVQ 185
           N  V +C E   T+    +++     V +         D     Y+ + R++     ++ 
Sbjct: 320 NEKVALCFEATYTDIFFTVEIIDSTSVDSGAIMLPILVD----AYTAVARNFCSVSMVIS 375

Query: 186 QRASMLRFSTQNAAFLS*CRQGRELSCT--LDAL 281
              +++ +     +F+  C Q R ++CT  LDA+
Sbjct: 376 PLVTLVVYDIYTCSFIGLCTQRRTINCTRILDAI 409



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>K1688_HUMAN (Q9C0H5) Protein KIAA1688|
          Length = 1083

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 147 IYRDYKRAGQLVQQRASMLRFST 215
           IYRDY   GQL+  R S LR+++
Sbjct: 185 IYRDYSADGQLLHYRTSSLRWNS 207



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>PANB_PSEFL (Q9ZEP8) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC|
           2.1.2.11) (Ketopantoate hydroxymethyltransferase)
          Length = 266

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 117 ADLP*RVYSTIYRDYKRAGQLVQQRASMLR 206
           ADLP   Y+T+ + ++ AG+L+Q  A M++
Sbjct: 83  ADLPFMGYATLEQTFQNAGKLMQAGAHMIK 112



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>YEAH_SALTI (Q8Z6E7) UPF0229 protein yeaH|
          Length = 428

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 115 KQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTL 225
           K+ Y      +Y    S+ DNW+ ++ LC+  L K L
Sbjct: 330 KERYDPSQWNIYAAQASDGDNWADDSPLCHEILAKKL 366



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>YEAH_ECOLI (P76235) UPF0229 protein yeaH|
          Length = 427

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 115 KQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTL 225
           K+ Y      +Y    S+ DNW+ ++ LC+  L K L
Sbjct: 329 KERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKL 365



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>YEAH_ECO57 (Q8XDT8) UPF0229 protein yeaH|
          Length = 427

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 115 KQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTL 225
           K+ Y      +Y    S+ DNW+ ++ LC+  L K L
Sbjct: 329 KERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKL 365



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>Y986_VIBPA (Q87R12) UPF0229 protein VP0986|
          Length = 423

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 115 KQTYPEGFIRLYTEITSELDNWSSNAHLCYVFLLKTL 225
           K+ YP G   +Y    S+ DNW+ ++  C   L+  L
Sbjct: 329 KERYPVGQWNIYAAQASDGDNWADDSPRCRDLLVNKL 365


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,938,498
Number of Sequences: 219361
Number of extensions: 909190
Number of successful extensions: 2011
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2011
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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