>gb|AY103745.1| Zea mays PCO097601 mRNA sequence
          Length = 1567

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 169  ctatatatttctataaacaactc 191
            |||||||||||||||||||||||
Sbjct: 1507 ctatatatttctataaacaactc 1485

>gb|AC147113.2| Mus musculus BAC clone RP24-120I13 from chromosome Y, complete sequence
          Length = 196099

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   tccaatctcagatccgctcca 277
             |||||||||||||||||||||
Sbjct: 35641 tccaatctcagatccgctcca 35621

>gb|AC140493.3| Mus musculus BAC clone RP24-137I9 from chromosome Y, complete sequence
          Length = 150186

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   tccaatctcagatccgctcca 277
             |||||||||||||||||||||
Sbjct: 95185 tccaatctcagatccgctcca 95205

>gb|AC174475.4| Mus musculus BAC clone RP24-169K6 from chromosome y, complete sequence
          Length = 199928

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   tccaatctcagatccgctcca 277
             |||||||||||||||||||||
Sbjct: 60079 tccaatctcagatccgctcca 60099

>emb|X01777.1|HVB3HORD Barley mRNA fragment for B3-hordein
          Length = 954

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 161 tgattcaactatatatttcta 181
           |||||||||||||||||||||
Sbjct: 833 tgattcaactatatatttcta 813

>gb|AF016238.1|HVHORD2 Hordeum vulgare seed storage protein (HORDB3a) mRNA 3' end
           sequence, partial cds
          Length = 231

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 161 tgattcaactatatatttcta 181
           |||||||||||||||||||||
Sbjct: 134 tgattcaactatatatttcta 114

>gb|DQ267478.1| Hordeum vulgare subsp. vulgare clone Hn6 B hordein gene, complete cds
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  tgattcaactatatatttcta 181
            |||||||||||||||||||||
Sbjct: 1102 tgattcaactatatatttcta 1082

>gb|M23836.1|BLYHOR21A Hordeum vulgare hordein (hor2-1) mRNA, 3' UTR
          Length = 165

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 161 tgattcaactatatatttcta 181
           |||||||||||||||||||||
Sbjct: 41  tgattcaactatatatttcta 21

>ref|NM_187920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 330

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ctccaccaatctcaccaccc 292
           ||||||||||||||||||||
Sbjct: 48  ctccaccaatctcaccaccc 29

>gb|AY659938.1| Oryza sativa (japonica cultivar-group) RAA1 (RAA1) mRNA, complete
           cds
          Length = 729

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ctccaccaatctcaccaccc 292
           ||||||||||||||||||||
Sbjct: 100 ctccaccaatctcaccaccc 81

>ref|XM_716488.1| Candida albicans SC5314 putative nuclear condensin complex subunit G
            (CaO19_9190), mRNA
          Length = 3780

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 19   agctgattaaaattggtacaaatt 42
            |||||||||||| |||||||||||
Sbjct: 3338 agctgattaaaagtggtacaaatt 3361

>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence
          Length = 157001

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   agaattgattcaactatatatttc 179
             |||||||||||||||| |||||||
Sbjct: 41316 agaattgattcaactaaatatttc 41339

>gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosome 19, complete sequence
          Length = 230596

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tttgtgtcaatttgtaagaa 61
              ||||||||||||||||||||
Sbjct: 181863 tttgtgtcaatttgtaagaa 181882

>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
             complete sequence
          Length = 114380

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    attaaaattggtacaaattttgtg 47
             |||||||||| |||||||||||||
Sbjct: 47570 attaaaattgttacaaattttgtg 47593

>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence
          Length = 163773

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    agaattgattcaactatatatttc 179
              |||||||||||||||| |||||||
Sbjct: 151929 agaattgattcaactaaatatttc 151952

>gb|BC058201.1| Xenopus laevis hypothetical protein MGC68557, mRNA (cDNA clone
           MGC:68557 IMAGE:4031378), complete cds
          Length = 971

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgcgcatgcatacacactgt 219
           ||||||||||||||||||||
Sbjct: 422 tgcgcatgcatacacactgt 441

>gb|BC041518.1| Xenopus laevis proteasome (prosome, macropain) subunit, alpha type,
           3, mRNA (cDNA clone MGC:53724 IMAGE:4930219), complete
           cds
          Length = 974

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgcgcatgcatacacactgt 219
           ||||||||||||||||||||
Sbjct: 421 tgcgcatgcatacacactgt 440

>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence
          Length = 143015

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    attaaaattggtacaaattttgtg 47
             |||||||||| |||||||||||||
Sbjct: 11047 attaaaattgttacaaattttgtg 11024

>gb|DQ417605.1| Bombyx mori aspartic protease (CatD) gene, complete cds
          Length = 6201

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   aaaacacttatacaacatca 118
            ||||||||||||||||||||
Sbjct: 1305 aaaacacttatacaacatca 1286

>emb|AL136164.8| Human DNA sequence from clone RP3-331H24 on chromosome 6 Contains the
             5' end of a novel gene, the gene for a novel protein
             similar to opioid growth factor receptor and a CpG island,
             complete sequence
          Length = 108253

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   atatatttctataaacaactctgg 194
             |||||||||||||||| |||||||
Sbjct: 20311 atatatttctataaactactctgg 20334

>emb|CR932397.9| Zebrafish DNA sequence from clone CH211-123E19 in linkage group 13,
             complete sequence
          Length = 173825

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tattaaagctgattaaaatt 32
             ||||||||||||||||||||
Sbjct: 92592 tattaaagctgattaaaatt 92573

>emb|BX537343.8| Zebrafish DNA sequence from clone CH211-192A19 in linkage group 16,
             complete sequence
          Length = 59017

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   ttcaactatatatttctata 183
             ||||||||||||||||||||
Sbjct: 40475 ttcaactatatatttctata 40456

>emb|BX323872.6| Zebrafish DNA sequence from clone RP71-25E6, complete sequence
          Length = 184178

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ttcaactatatatttctata 183
              ||||||||||||||||||||
Sbjct: 181477 ttcaactatatatttctata 181496

>dbj|AB089431.1| Cryptomeria japonica DNA, microsatellite region, clone:Cjg0193F
          Length = 309

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 aaccaatagagagaattgat 164
           ||||||||||||||||||||
Sbjct: 139 aaccaatagagagaattgat 120

>gb|AC162311.7| Mus musculus 6 BAC RP23-81K19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 266441

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caaattttgtgtcaatttgt 56
             ||||||||||||||||||||
Sbjct: 67091 caaattttgtgtcaatttgt 67110

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 126     aaataaaagatggatcatgaaccaatag 153
               |||||||||||||| || ||||||||||
Sbjct: 3398188 aaataaaagatggaacaggaaccaatag 3398161

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 172     tatatttctataaacaactc 191
               ||||||||||||||||||||
Sbjct: 7680653 tatatttctataaacaactc 7680634

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     ctccaccaatctcaccaccc 292
               ||||||||||||||||||||
Sbjct: 8585799 ctccaccaatctcaccaccc 8585818

>gb|AC079354.4| Homo sapiens BAC clone RP11-1145F21 from 2, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    ctgattaaaattggtacaaatttt 44
             |||||| |||||||||||||||||
Sbjct: 78485 ctgattcaaattggtacaaatttt 78508

>gb|AC103779.5| Homo sapiens chromosome 8, clone RP11-466B9, complete sequence
          Length = 115682

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   atggatcatgaaccaataga 154
             ||||||||||||||||||||
Sbjct: 62993 atggatcatgaaccaataga 62974

>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0462H08
          Length = 139152

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ctccaccaatctcaccaccc 292
             ||||||||||||||||||||
Sbjct: 17994 ctccaccaatctcaccaccc 18013

>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1136_C11
          Length = 124827

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    tatatttctataaacaactc 191
              ||||||||||||||||||||
Sbjct: 103908 tatatttctataaacaactc 103889

>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 126   aaataaaagatggatcatgaaccaatag 153
             |||||||||||||| || ||||||||||
Sbjct: 38008 aaataaaagatggaacaggaaccaatag 37981

>dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P03, full
            insert sequence
          Length = 3307

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 172  tatatttctataaacaactc 191
            ||||||||||||||||||||
Sbjct: 3149 tatatttctataaacaactc 3130

>dbj|AK070626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F13, full
           insert sequence
          Length = 786

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ctccaccaatctcaccaccc 292
           ||||||||||||||||||||
Sbjct: 144 ctccaccaatctcaccaccc 125

>dbj|AK058670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H02, full
           insert sequence
          Length = 239

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 tatatttctataaacaactc 191
           ||||||||||||||||||||
Sbjct: 78  tatatttctataaacaactc 59

>gb|AC154010.3| Mus musculus 6 BAC RP24-493P16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 213098

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caaattttgtgtcaatttgt 56
              ||||||||||||||||||||
Sbjct: 162200 caaattttgtgtcaatttgt 162219

>emb|AL772283.4| Mouse DNA sequence from clone RP23-258N14 on chromosome X, complete
              sequence
          Length = 132296

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     attaaagctgattaaaattg 33
              ||||||||||||||||||||
Sbjct: 116433 attaaagctgattaaaattg 116452


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,222,409
Number of Sequences: 3902068
Number of extensions: 3222409
Number of successful extensions: 66175
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66046
Number of HSP's gapped (non-prelim): 129
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)