ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARY2_MOUSE (P50295) Arylamine N-acetyltransferase 2 (EC 2.3.1.5)... 30 2.0
2ARY2_MESAU (P50293) Arylamine N-acetyltransferase 2 (EC 2.3.1.5)... 29 3.5
3E434_ADECT (P87568) Early E4 30 kDa protein 28 4.5
4ARY1_HUMAN (P18440) Arylamine N-acetyltransferase 1 (EC 2.3.1.5)... 28 4.5
5IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4... 28 5.9
6OPSL_LIMPO (P35360) Lateral eye opsin 28 7.7

>ARY2_MOUSE (P50295) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide|
           acetylase 2) (N-acetyltransferase type 2) (NAT-2)
          Length = 290

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 227 AQQFCSEHGPFGVHCIVGTT 286
           ++ FCS   P GVHC+VG+T
Sbjct: 219 SKSFCSLQTPEGVHCLVGST 238



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>ARY2_MESAU (P50293) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide|
           acetylase 2) (Arylamine N-acetyltransferase,
           polymorphic) (PNAT) (N-acetyltransferase type 2) (NAT-2)
           (AT-2)
          Length = 290

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 227 AQQFCSEHGPFGVHCIVGTT 286
           ++ FCS   P GVHC+VG T
Sbjct: 219 SKSFCSLQTPEGVHCLVGCT 238



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>E434_ADECT (P87568) Early E4 30 kDa protein|
          Length = 259

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 291 WLVVPTMQCTPNGPCSLQNCWAW 223
           WLV+    C+    CSL+NC  W
Sbjct: 177 WLVLKCKSCSLQNYCSLKNCAVW 199



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>ARY1_HUMAN (P18440) Arylamine N-acetyltransferase 1 (EC 2.3.1.5) (Arylamide|
           acetylase 1) (Arylamine N-acetyltransferase,
           monomorphic) (MNAT) (N-acetyltransferase type 1) (NAT-1)
          Length = 290

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 227 AQQFCSEHGPFGVHCIVGTT 286
           ++ FCS   P GVHC+VG T
Sbjct: 219 SKSFCSLQTPDGVHCLVGFT 238



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>IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1|
           protease)
          Length = 1545

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -1

Query: 240 QNCWAWDINVSFAASLYMGRKLETYTRNLSTN 145
           +N  A +INV+  A+LY GR +E+ T N++ +
Sbjct: 743 RNFKATNINVTNNATLYSGRNVESITSNITAS 774



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>OPSL_LIMPO (P35360) Lateral eye opsin|
          Length = 376

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
 Frame = -2

Query: 227 HGISMLVLQLVCIWGGNWKHIPVI*AQ--------TRVTTDAMSKDYLYLNFDA*YYVLY 72
           H  + L+L  V IW G W  +P             T  T D ++KD+      A Y V+Y
Sbjct: 160 HKKATLLLLFVWIWSGGWTILPFFGWSRYVPEGNLTSCTVDYLTKDW----SSASYVVIY 215

Query: 71  SLKSY 57
            L  Y
Sbjct: 216 GLAVY 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,303,597
Number of Sequences: 219361
Number of extensions: 752545
Number of successful extensions: 1451
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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