>MEC10_CAEEL (P34886) Degenerin mec-10 (Mechanosensory abnormality protein 10)|
          Length = 724

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = -1

Query: 352 EKKKNRT*SCHLELRWSDPGILKSPEKPLQSLSSRRGKREAEVAKQAIICRISLTNLSKT 173
           +++ N    CH + +W++       E  L S  +++G + +E+ K+  IC       SK 
Sbjct: 276 DRQTNDAWPCHRKEQWTNTTCQTCDEHYLCSKKAKKGTKRSELKKEPCICE------SKG 329

Query: 172 LW---HHHASILL 143
           L+   H HA+++L
Sbjct: 330 LFCIKHEHAAMVL 342

>LONM_HUMAN (P36776) Lon protease homolog, mitochondrial precursor (EC|
           3.4.21.-) (Lon protease-like protein) (LONP) (LONHs)
          Length = 959

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 1   HFNQQISQQNKMLYSLKNCESIFQQDRRYIKIIVAIPIGQYSNE 132
           H    + ++   L  L N  S F   R Y+  + +IP G+YSNE
Sbjct: 433 HVMDVVDEELSKLGLLDNHSSEFNVTRNYLDWLTSIPWGKYSNE 476

>CJ006_MOUSE (Q6P9P0) Protein C10orf6 homolog|
          Length = 1278

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 18  FPTK*NAVQSKELRKHIPTRQAIHQNHRCNSNW 116
           + TK   V S+E  +HIP+ + ++Q H    +W
Sbjct: 351 YHTKSKRVLSREAPRHIPSERKVYQTHCTEDSW 383

>LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 940

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 1   HFNQQISQQNKMLYSLKNCESIFQQDRRYIKIIVAIPIGQYSNE 132
           H  Q I ++   L  L+   S F   R Y+  +  +P G YSNE
Sbjct: 374 HVLQVIEEELTKLQLLEASSSEFNVTRNYLDWLTILPWGNYSNE 417

>SYA_LACPL (Q88V10) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 880

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 82  RYIKIIVAIPIGQYSNEANGTTKLRHGGAIGFWRGLS 192
           +Y KI+  + IG YS E +G T +++   +G ++ +S
Sbjct: 652 KYGKIVRVVSIGDYSIEFDGGTHVKNSSELGLFKIVS 688

>NU2M_SYLME (Q2TQ18) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 347

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 233 LPLTPSTREALERLLWRFQNTRIRPSQFQVAASSPILLLLRSTTTI 370
           L + P+T     +L W+FQ T+I P    + A+S + L L    T+
Sbjct: 302 LTMFPTTNNM--KLAWQFQTTKILPMMAPLIATSTLTLPLTPLLTL 345

>AL4A1_HUMAN (P30038) Delta-1-pyrroline-5-carboxylate dehydrogenase,|
           mitochondrial precursor (EC 1.5.1.12) (P5C
           dehydrogenase) (Aldehyde dehydrogenase 4A1)
          Length = 563

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 364 GGRSEKKKNRT*SCHLELRWSDPGILKSPEKPL 266
           G R+    ++    H  LRW+ P ++K   KPL
Sbjct: 522 GARASGTNDKPGGPHYILRWTSPQVIKETHKPL 554

>Y627_BARHE (Q8VQ25) Hypothetical zinc metalloprotease BH06270 (EC 3.4.24.-)|
          Length = 358

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 116 PIGIATMILMYRLS-CWNMLSQFFRLYSILFCW 21
           PI      +++RL  C+ +L  FF L++  FCW
Sbjct: 324 PISAKIREIIFRLGLCFVLLFMFFALFNDYFCW 356

>CO4_RAT (P08649) Complement C4 precursor [Contains: Complement C4 beta chain;|
            Complement C4 alpha chain; C4a anaphylatoxin; Complement
            C4 gamma chain]
          Length = 1737

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 301  DPGILKSPEKPLQSLSSRRGKREAEVAKQA 212
            DP +   P  PLQ    RR +R  E  K A
Sbjct: 1423 DPSVHSQPVTPLQLFEGRRSRRRREAPKAA 1452

>AL4A1_MOUSE (Q8CHT0) Delta-1-pyrroline-5-carboxylate dehydrogenase,|
           mitochondrial precursor (EC 1.5.1.12) (P5C
           dehydrogenase) (Aldehyde dehydrogenase 4A1)
          Length = 562

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 364 GGRSEKKKNRT*SCHLELRWSDPGILKSPEKPL 266
           G R+    ++    H  LRW+ P ++K   KPL
Sbjct: 521 GARASGTNDKPGGPHYILRWTSPQVIKETHKPL 553


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,818,016
Number of Sequences: 219361
Number of extensions: 1092548
Number of successful extensions: 3607
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3607
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)