ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl11g12 |
|---|---|
| Clone Library Name | barley_pub |
>PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = +1 Query: 55 PEGTSHHRLHYWAKQGIFSAHNNALTGSQLS*ASACRSNPSCTHPYC 195 PE ++ HYW I S+HN LTG Q S S+ + C C Sbjct: 319 PETMNNPLSHYW----ISSSHNTYLTGDQFSSESSLEAYARCLRMGC 361
>PLCG1_MOUSE (Q62077) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1302 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 55 PEGTSHHRLHYWAKQGIFSAHNNALTGSQLS*ASACRSNPSCTHPYC 195 P+ ++ HYW I S+HN LTG Q S S+ + C C Sbjct: 319 PDTMNNPLSHYW----ISSSHNTYLTGDQFSSESSLEAYARCLRMGC 361
>PLCG1_BOVIN (P08487) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1291 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 55 PEGTSHHRLHYWAKQGIFSAHNNALTGSQLS*ASACRSNPSCTHPYC 195 P+ ++ HYW I S+HN LTG Q S S+ + C C Sbjct: 319 PDTMNNPLSHYW----ISSSHNTYLTGDQFSSESSLEAYARCLRMGC 361
>PLCG1_HUMAN (P19174) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 55 PEGTSHHRLHYWAKQGIFSAHNNALTGSQLS*ASACRSNPSCTHPYC 195 P+ ++ HYW I S+HN LTG Q S S+ + C C Sbjct: 319 PDTMNNPLSHYW----ISSSHNTYLTGDQFSSESSLEAYARCLRMGC 361
>SYV_BUCAP (Q8K9I1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 960 Score = 28.5 bits (62), Expect = 5.0 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +1 Query: 40 KNNGGPEGTSHHRLHYWAKQGIFSAHNN 123 K N P+ H ++W K G F +NN Sbjct: 2 KKNYNPKDIEEHLYNFWEKNGFFKPNNN 29
>NUDT7_ARATH (Q9SU14) Nudix hydrolase 7 (EC 3.6.1.-) (AtNUDT7) (ADP-ribose| pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase) (EC 3.6.1.22) Length = 282 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 Query: 15 MPEVCQKKKKQRRAGGNITPSTSLLGKTRDFFC 113 M +CQKK ++ G I P+T+ GK +C Sbjct: 231 MANICQKKCEEEYLGFAIVPTTTSSGKESFIYC 263
>PLCG2_RAT (P24135) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 2 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-2) (Phospholipase C-gamma-2) (PLC-IV) Length = 1265 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 82 HYWAKQGIFSAHNNALTGSQLS*ASACRSNPSCTHPYC 195 HYW I S+HN LTG QL S+ + C C Sbjct: 320 HYW----ISSSHNTYLTGDQLRSESSTEAYIRCLRAGC 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,574,091 Number of Sequences: 219361 Number of extensions: 602836 Number of successful extensions: 1577 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1569 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1577 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
