ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... 31 0.87
2PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit... 28 4.3
3SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 28 4.3
4SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 28 4.3
5HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (E... 28 4.3
6SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment) 28 7.4
7PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit... 28 7.4
8OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1 28 7.4
9TENS1_HUMAN (Q9HBL0) Tensin-1 28 7.4
10Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c 27 9.7
11IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha) (... 27 9.7
12IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)... 27 9.7
13PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb) 27 9.7
14AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC ... 27 9.7

>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220|
           antigen) [Contains: Insulin receptor alpha subunit;
           Insulin receptor beta subunit]
          Length = 1382

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
 Frame = +3

Query: 132 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 287
           F++ QD  H  + S +  C Q V+ N  CIP+    S +T  N++     P L      C
Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339

Query: 288 HFFTGQQPCDHI 323
           H   G++  D +
Sbjct: 340 HLLEGEKTIDSV 351



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>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
 Frame = +3

Query: 141 IQDHSKRT--SIQMNCPQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPF 281
           I++H K+   ++    P+ VL  +  +P  + + +H           T  NATR FLLPF
Sbjct: 75  IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134

Query: 282 L 284
           L
Sbjct: 135 L 135



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>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 305 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 195
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 305 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 195
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 111  PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 251
            P  S+A    +QDHS ++S   + P+  ++  S  P  NI    SS T Q
Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826



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>SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment)|
          Length = 280

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 140 HPRSQQKNIHPNELSTTSPGQHFMHPT 220
           +P S Q   +PN L     G +FMHPT
Sbjct: 24  YPTSNQLKSYPNGLLNPFNGTNFMHPT 50



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>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58) (Transplantation antigen P91A) (Tum-P91A antigen)
          Length = 530

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%)
 Frame = +3

Query: 183 PQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPFL 284
           P+ VL  +  +P  + + +H           T  NATR FLLPFL
Sbjct: 87  PRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFL 131



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>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1|
          Length = 310

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 259 VAFCGV*EL*MLFCGMHEMLSRTSCGQFIWMDVLLL 152
           ++FCG  E+  +FC +  +L  T CG+    +VL++
Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200



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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 238  LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 336
            L HH+M  P  + FH   +SS  S+ ATT  +P+
Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245



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>Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 210 CIPQNNIQSSHTPQNATRSFLLPFLC 287
           C+ Q  +Q+SH  +N    F+LP +C
Sbjct: 123 CVDQITMQNSHLDKNKFHLFILPGIC 148



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>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha) (RL/IF-1)
          Length = 314

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 162 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 308
           T IQ    QL L+N+  +P++  + S+  ++      LP+    F GQ+
Sbjct: 263 TRIQQQLGQLTLENLQTLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311



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>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha)
          Length = 314

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 162 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 308
           T IQ    QL L+N+  +P++  + S+  ++      LP+    F GQ+
Sbjct: 263 TRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311



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>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)|
          Length = 390

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 208 HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAP 333
           H  H  + R  I H     +SF H+  +   DSN +++ D P
Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204



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>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)|
           (Transaminase A)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 338 AFGASYVVARLLSSEEMTQEWKKE 267
           A+GA  +VA+LL + E+T++W K+
Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,398,761
Number of Sequences: 219361
Number of extensions: 975781
Number of successful extensions: 2080
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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