ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104077.2| Homo sapiens BAC clone RP11-413P19 from 4, comple... 48 0.018
2ref|XM_519464.1| PREDICTED: Pan troglodytes protein disulfide is... 44 0.27
3gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 44 0.27
4gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell... 44 0.27
5gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 ... 44 0.27
6emb|CR394545.9| Zebrafish DNA sequence from clone CH211-103E6 in... 44 0.27
7gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome ... 42 1.1
8gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.1
9emb|CR407592.10| Zebrafish DNA sequence from clone DKEY-166N5, c... 42 1.1
10emb|AJ245438.1|TMA245438 Tuber magnatum mRNA for protein kinase ... 42 1.1
11emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 ... 42 1.1
12gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.1
13gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, com... 42 1.1
14emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 i... 42 1.1
15emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 ... 42 1.1
16emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 i... 42 1.1
17emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-7... 42 1.1
18dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.1
19gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 40 4.3
20ref|XM_516719.1| PREDICTED: Pan troglodytes similar to TXNRD3 pr... 40 4.3
21gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, com... 40 4.3
22gb|AC165305.4| Mus musculus chromosome 8, clone RP23-101P20, com... 40 4.3
23emb|CR769787.7| Zebrafish DNA sequence from clone DKEY-148G19 in... 40 4.3
24gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosom... 40 4.3
25gb|AE004355.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 4.3
26gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's... 40 4.3
27emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in l... 40 4.3
28emb|BX649443.16| Human DNA sequence from clone CTD-2589D3 on chr... 40 4.3
29emb|AL161774.49| Human DNA sequence from clone RP11-245B11 on ch... 40 4.3
30gb|AF475112.1| Triticum aestivum geranylgeranylated protein ATGP... 40 4.3
31gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, com... 40 4.3
32emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 4.3
33emb|BX065744.1|CNS09MW4 Single read from an extremity of a full-... 40 4.3
34emb|BX065743.1|CNS09MW3 Single read from an extremity of a full-... 40 4.3
35gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 4.3
36emb|BX897678.1| Neurospora crassa DNA linkage group VI BAC clone... 40 4.3
37emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in... 40 4.3
38gb|AF239100.1| Acropora palmata isolate Apa-Red15.5 18S ribosoma... 40 4.3
39emb|BX248577.16| Zebrafish DNA sequence from clone CH211-162H21 ... 40 4.3
40gb|AC121333.5| Homo sapiens 3 BAC RP11-691G17 (Roswell Park Canc... 40 4.3
41emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 ... 40 4.3
42emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in ... 40 4.3
43gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 4.3
44gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence 40 4.3
45dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, ... 40 4.3
46gb|AC150908.6| Pan troglodytes BAC clone CH251-513A23 from chrom... 40 4.3
47emb|AL935334.14| Zebrafish DNA sequence from clone CH211-199B20 ... 40 4.3
48gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 4.3
49emb|AL929493.20| Zebrafish DNA sequence from clone CH211-157D2, ... 40 4.3
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
51gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 4.3
52emb|BX323024.11| Zebrafish DNA sequence from clone DKEYP-2B10 in... 40 4.3
53gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, co... 40 4.3
54dbj|AB111925.2| Oryzias latipes gene, complete cds 40 4.3
55gb|AC113611.3| Homo sapiens BAC clone RP11-421M20 from 4, comple... 40 4.3
56gb|AC026201.3|AC026201 Homo sapiens chromosome 11 clone RP11-546... 40 4.3
57gb|AC006360.2|AC006360 Homo sapiens PAC clone RP5-1140N14 from 1... 40 4.3
58gb|AC021998.4|AC021998 Homo sapiens chromosome 11 clone RP11-116... 40 4.3
59gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence 40 4.3
60gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, c... 40 4.3
61dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
62ref|XM_565632.1| Anopheles gambiae str. PEST ENSANGP00000027179 ... 40 4.3
63emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chr... 40 4.3
64emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 i... 40 4.3
65emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 ... 40 4.3
66emb|BX649383.4| Zebrafish DNA sequence from clone DKEY-247I12 in... 40 4.3
67emb|BX470096.16| Zebrafish DNA sequence from clone DKEY-163O15 i... 40 4.3
68emb|BX469885.9| Zebrafish DNA sequence from clone DKEY-164N2 in ... 40 4.3
69gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 4.3
70emb|AJ544613.1|TRU544613 Takifugu rubripes dmd gene for putative... 40 4.3
71gb|AC107453.14| Mus musculus chromosome 15, clone RP23-315F3, co... 40 4.3
72dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 4.3
73emb|AL929286.13| Zebrafish DNA sequence from clone CH211-117K10 ... 40 4.3
74emb|BX294103.11| Zebrafish DNA sequence from clone CH211-257A8 i... 40 4.3
75emb|BX005449.4| Zebrafish DNA sequence from clone CH211-174A15 i... 40 4.3
76emb|CR555295.8| Zebrafish DNA sequence from clone DKEY-45D22 in ... 40 4.3
77emb|BX005254.9| Zebrafish DNA sequence from clone DKEY-81P22 in ... 40 4.3
78emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, ... 40 4.3
79gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, compl... 40 4.3 
>gb|AC104077.2| Homo sapiens BAC clone RP11-413P19 from 4, complete sequence
          Length = 122108

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 96     aaacagaaacaacttcactaataa 119
              ||||||||||||||||||||||||
Sbjct: 105580 aaacagaaacaacttcactaataa 105603
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>ref|XM_519464.1| PREDICTED: Pan troglodytes protein disulfide isomerase related
           protein (calcium-binding protein, intestinal-related)
           (LOC463822), mRNA
          Length = 2829

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 186 gggagggcctacgacggcggagccga 211
           ||||||||||||| ||||||||||||
Sbjct: 39  gggagggcctacggcggcggagccga 64
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>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 146   ccccatagatccatccgtccatccat 171
             |||||||||||||||| |||||||||
Sbjct: 54573 ccccatagatccatccatccatccat 54598
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>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177941

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 146    ccccatagatccatccgtccatccat 171
              |||||||||||||||| |||||||||
Sbjct: 158677 ccccatagatccatccatccatccat 158702
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>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 146    ccccatagatccatccgtccatccat 171
              |||||||||||||||| |||||||||
Sbjct: 200564 ccccatagatccatccatccatccat 200589
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>emb|CR394545.9| Zebrafish DNA sequence from clone CH211-103E6 in linkage group 15,
             complete sequence
          Length = 177018

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 148   ccatagatccatccgtccatccatca 173
             ||||| ||||||||||||||||||||
Sbjct: 77929 ccataaatccatccgtccatccatca 77904



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 148   ccatagatccatccgtccatccatca 173
             ||||| ||||||||||||||||||||
Sbjct: 77550 ccataaatccatccgtccatccatca 77525
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>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence
          Length = 206083

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    acccaaacagaaacaacttca 112
             |||||||||||||||||||||
Sbjct: 92623 acccaaacagaaacaacttca 92603
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    acgacggcggagccgagcccg 216
              |||||||||||||||||||||
Sbjct: 582008 acgacggcggagccgagcccg 582028
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>emb|CR407592.10| Zebrafish DNA sequence from clone DKEY-166N5, complete sequence
          Length = 147299

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    gatccatccgtccatccatca 173
              |||||||||||||||||||||
Sbjct: 109312 gatccatccgtccatccatca 109332
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>emb|AJ245438.1|TMA245438 Tuber magnatum mRNA for protein kinase C homologue, partial
          Length = 2973

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 300 cctcctccagcggcggccggg 320
           |||||||||||||||||||||
Sbjct: 668 cctcctccagcggcggccggg 648
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>emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 in linkage group 24,
             complete sequence
          Length = 168886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 148   ccatagatccatccgtccatccatc 172
             |||||||||||||| ||||||||||
Sbjct: 87320 ccatagatccatccatccatccatc 87296
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 242     gtcgagcttggacaggagccg 262
               |||||||||||||||||||||
Sbjct: 2629594 gtcgagcttggacaggagccg 2629614
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>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence
          Length = 159371

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 251   ggacaggagccgctgcatctcagca 275
             |||||||||| ||||||||||||||
Sbjct: 26832 ggacaggagcagctgcatctcagca 26856
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>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
              complete sequence
          Length = 171213

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 148    ccatagatccatccgtccatccatc 172
              ||||||||||||| |||||||||||
Sbjct: 149612 ccatagatccatctgtccatccatc 149636
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>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16,
            complete sequence
          Length = 161603

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 148  ccatagatccatccgtccatccatc 172
            ||||| |||||||||||||||||||
Sbjct: 7919 ccatacatccatccgtccatccatc 7895
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>emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 in linkage group 20,
            complete sequence
          Length = 150884

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 148  ccatagatccatccgtccatccatc 172
            |||||||||||||| ||||||||||
Sbjct: 5421 ccatagatccatccatccatccatc 5445
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>emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-725G5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195835

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    atccatccgtccatccatcac 174
              |||||||||||||||||||||
Sbjct: 103597 atccatccgtccatccatcac 103617
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>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8
          Length = 230879

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    caacaaaagacattcatccag 56
             |||||||||||||||||||||
Sbjct: 97819 caacaaaagacattcatccag 97799
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   atccatccgtccatccatcactac 177
             |||||||| |||||||||||||||
Sbjct: 46320 atccatccatccatccatcactac 46297
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>ref|XM_516719.1| PREDICTED: Pan troglodytes similar to TXNRD3 protein (LOC460662),
           mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 aggcccaggaggcggctgcg 237
           ||||||||||||||||||||
Sbjct: 590 aggcccaggaggcggctgcg 571
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>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence
          Length = 216103

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     taataataatcaacaaaaga 45
              ||||||||||||||||||||
Sbjct: 147848 taataataatcaacaaaaga 147829
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>gb|AC165305.4| Mus musculus chromosome 8, clone RP23-101P20, complete sequence
          Length = 193230

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 97899 atccatccgtccatccatca 97880
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>emb|CR769787.7| Zebrafish DNA sequence from clone DKEY-148G19 in linkage group 1,
             complete sequence
          Length = 142653

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 87496 atccatccgtccatccatca 87515
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>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete
             sequence
          Length = 169506

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   atccatccgtccatccatcactac 177
             |||||||| |||||||||||||||
Sbjct: 11104 atccatccatccatccatcactac 11081
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>gb|AE004355.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 12
            of 93 of the complete chromosome
          Length = 12558

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  ttgtcgagcttggacaggagccgc 263
            |||||||||||||| |||||||||
Sbjct: 6118 ttgtcgagcttggaaaggagccgc 6095
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>gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 82009

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 149   catagatccatccgtccatccatc 172
             ||||||||||||| ||||||||||
Sbjct: 69776 catagatccatccatccatccatc 69799
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>emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in linkage group 17, complete
              sequence
          Length = 159225

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 156445 atccatccgtccatccatca 156464
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>emb|BX649443.16| Human DNA sequence from clone CTD-2589D3 on chromosome X Contains part
             of the DHRSX gene for dehydrogenase/reductase (SDR family)
             X-linked and a novel gene, complete sequence
          Length = 79564

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 31169 atccatccgtccatccatca 31150
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>emb|AL161774.49| Human DNA sequence from clone RP11-245B11 on chromosome 13 Contains
            the 5' end of the gene for RAS p21 protein activator
            (GTPase activating protein) 3 (Ins(1,3,4,5)P4-binding
            protein) (GAP1IP4BP), a novel gene and 20 CpG islands,
            complete sequence
          Length = 162296

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  ccatccgtccatccatcact 175
            ||||||||||||||||||||
Sbjct: 2454 ccatccgtccatccatcact 2473
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>gb|AF475112.1| Triticum aestivum geranylgeranylated protein ATGP1 mRNA, partial
           cds
          Length = 531

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 292 cgggcgctcctcctccagcggcgg 315
           |||| |||||||||||||||||||
Sbjct: 132 cgggggctcctcctccagcggcgg 155
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>gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, complete sequence
          Length = 208877

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     taataataatcaacaaaaga 45
              ||||||||||||||||||||
Sbjct: 181169 taataataatcaacaaaaga 181150
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>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
             complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 78799 atccatccgtccatccatca 78780
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>emb|BX065744.1|CNS09MW4 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC49DA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 859

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ccatcactacggcaggcagg 187
           ||||||||||||||||||||
Sbjct: 159 ccatcactacggcaggcagg 140
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>emb|BX065743.1|CNS09MW3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC49DA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 874

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 ccatcactacggcaggcagg 187
           ||||||||||||||||||||
Sbjct: 719 ccatcactacggcaggcagg 738
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     tcttgtcgagcttggacagg 257
               ||||||||||||||||||||
Sbjct: 4136502 tcttgtcgagcttggacagg 4136521
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>emb|BX897678.1| Neurospora crassa DNA linkage group VI BAC clone B10H18
          Length = 74165

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ataataatcaacaaaagaca 47
             ||||||||||||||||||||
Sbjct: 20916 ataataatcaacaaaagaca 20897
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>emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in linkage group 17,
             complete sequence
          Length = 197949

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 85521 atccatccgtccatccatca 85540
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>gb|AF239100.1| Acropora palmata isolate Apa-Red15.5 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 487

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 gatccatccgtccatccatc 172
           ||||||||||||||||||||
Sbjct: 62  gatccatccgtccatccatc 81
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>emb|BX248577.16| Zebrafish DNA sequence from clone CH211-162H21 in linkage group 11,
             complete sequence
          Length = 155980

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 44894 atccatccgtccatccatca 44875
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>gb|AC121333.5| Homo sapiens 3 BAC RP11-691G17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142378

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 118435 atccatccgtccatccatca 118454
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>emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 in linkage group 25,
             complete sequence
          Length = 149598

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 74890 atccatccgtccatccatca 74871
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>emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in linkage group 8,
             complete sequence
          Length = 78433

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 70157 atccatccgtccatccatca 70176
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 148     ccatagatccatccgtccatccatcact 175
               |||| ||||||||| |||||||||||||
Sbjct: 7323085 ccattgatccatccatccatccatcact 7323058
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>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence
          Length = 133452

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 114528 atccatccgtccatccatca 114509
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>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
              homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 216080 atccatccgtccatccatca 216061
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>gb|AC150908.6| Pan troglodytes BAC clone CH251-513A23 from chromosome y, complete
              sequence
          Length = 195906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 148    ccatagatccatccgtccatccatcact 175
              |||| ||||||||| |||||||||||||
Sbjct: 134479 ccattgatccatccatccatccatcact 134506
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>emb|AL935334.14| Zebrafish DNA sequence from clone CH211-199B20 in linkage group 14,
             complete sequence
          Length = 191828

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 30157 atccatccgtccatccatca 30138



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 29727 atccatccgtccatccatca 29708
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 155875 atccatccgtccatccatca 155856
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>emb|AL929493.20| Zebrafish DNA sequence from clone CH211-157D2, complete sequence
          Length = 180578

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 149    catagatccatccgtccatccatc 172
              |||| |||||||||||||||||||
Sbjct: 174974 catacatccatccgtccatccatc 174951
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 153      gatccatccgtccatccatc 172
                ||||||||||||||||||||
Sbjct: 15438202 gatccatccgtccatccatc 15438183
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>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 94355 atccatccgtccatccatca 94336
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>emb|BX323024.11| Zebrafish DNA sequence from clone DKEYP-2B10 in linkage group 7, complete
              sequence
          Length = 178824

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    ccatagatccatccgtccatccat 171
              |||||||||||||| |||||||||
Sbjct: 153177 ccatagatccatccttccatccat 153154
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>gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, complete sequence
          Length = 162265

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 154115 atccatccgtccatccatca 154096
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>dbj|AB111925.2| Oryzias latipes gene, complete cds
          Length = 70179

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  atccatccgtccatccatca 173
            ||||||||||||||||||||
Sbjct: 5354 atccatccgtccatccatca 5373
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>gb|AC113611.3| Homo sapiens BAC clone RP11-421M20 from 4, complete sequence
          Length = 60597

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 34095 atccatccgtccatccatca 34114
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>gb|AC026201.3|AC026201 Homo sapiens chromosome 11 clone RP11-546N8 map 11q, complete sequence
          Length = 202218

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 145194 atccatccgtccatccatca 145213
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>gb|AC006360.2|AC006360 Homo sapiens PAC clone RP5-1140N14 from 14q24.3, complete sequence
          Length = 138271

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 117406 atccatccgtccatccatca 117387
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>gb|AC021998.4|AC021998 Homo sapiens chromosome 11 clone RP11-116N3 map 11, complete sequence
          Length = 142446

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 89558 atccatccgtccatccatca 89539
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>gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence
          Length = 190322

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gatccatccgtccatccatc 172
              ||||||||||||||||||||
Sbjct: 156915 gatccatccgtccatccatc 156896
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>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence
          Length = 180016

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  atccatccgtccatccatca 173
            ||||||||||||||||||||
Sbjct: 6666 atccatccgtccatccatca 6647
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1299_A11
          Length = 160099

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gatccatccgtccatccatc 172
             ||||||||||||||||||||
Sbjct: 87494 gatccatccgtccatccatc 87475
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>ref|XM_565632.1| Anopheles gambiae str. PEST ENSANGP00000027179
           (ENSANGG00000023277), partial mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 ccatcactacggcaggcagg 187
           ||||||||||||||||||||
Sbjct: 284 ccatcactacggcaggcagg 303
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>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete
             sequence
          Length = 266295

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 17461 atccatccgtccatccatca 17442
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>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19,
             complete sequence
          Length = 171679

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gatccatccgtccatccatc 172
             ||||||||||||||||||||
Sbjct: 92460 gatccatccgtccatccatc 92441
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>emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 in linkage group 21,
             complete sequence
          Length = 114670

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 92093 atccatccgtccatccatca 92112
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>emb|BX649383.4| Zebrafish DNA sequence from clone DKEY-247I12 in linkage group 1,
              complete sequence
          Length = 189528

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 103510 atccatccgtccatccatca 103491
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>emb|BX470096.16| Zebrafish DNA sequence from clone DKEY-163O15 in linkage group 19,
             complete sequence
          Length = 111728

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 72384 atccatccgtccatccatca 72365
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>emb|BX469885.9| Zebrafish DNA sequence from clone DKEY-164N2 in linkage group 19,
             complete sequence
          Length = 87215

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   gatccatccgtccatccatc 172
             ||||||||||||||||||||
Sbjct: 10077 gatccatccgtccatccatc 10096
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 200121 atccatccgtccatccatca 200102
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>emb|AJ544613.1|TRU544613 Takifugu rubripes dmd gene for putative dystrophin, exon 66
          Length = 2872

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  atccatccgtccatccatca 173
            ||||||||||||||||||||
Sbjct: 2788 atccatccgtccatccatca 2807
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>gb|AC107453.14| Mus musculus chromosome 15, clone RP23-315F3, complete sequence
          Length = 193381

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 32827 atccatccgtccatccatca 32808
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>dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-729P6, complete
              sequence
          Length = 189310

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 175594 atccatccgtccatccatca 175575
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>emb|AL929286.13| Zebrafish DNA sequence from clone CH211-117K10 in linkage group 11,
              complete sequence
          Length = 168222

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    atccatccgtccatccatca 173
              ||||||||||||||||||||
Sbjct: 154789 atccatccgtccatccatca 154808
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>emb|BX294103.11| Zebrafish DNA sequence from clone CH211-257A8 in linkage group 9,
             complete sequence
          Length = 193969

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ccatccgtccatccatcact 175
             ||||||||||||||||||||
Sbjct: 42677 ccatccgtccatccatcact 42658
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>emb|BX005449.4| Zebrafish DNA sequence from clone CH211-174A15 in linkage group 10,
             complete sequence
          Length = 142054

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 72486 atccatccgtccatccatca 72467
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>emb|CR555295.8| Zebrafish DNA sequence from clone DKEY-45D22 in linkage group 11,
             complete sequence
          Length = 147157

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    cctgcctagacccaaacaga 102
             ||||||||||||||||||||
Sbjct: 23636 cctgcctagacccaaacaga 23617
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>emb|BX005254.9| Zebrafish DNA sequence from clone DKEY-81P22 in linkage group 23,
             complete sequence
          Length = 160012

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   atccatccgtccatccatca 173
             ||||||||||||||||||||
Sbjct: 48585 atccatccgtccatccatca 48566
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>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence
          Length = 208059

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    ccatagatccatccgtccatccat 171
              |||||||||||||| |||||||||
Sbjct: 170793 ccatagatccatccttccatccat 170816
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>gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, complete sequence
          Length = 210613

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    atccatccgtccatccatcactac 177
              |||||||| |||||||||||||||
Sbjct: 111477 atccatccatccatccatcactac 111454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,512,181
Number of Sequences: 3902068
Number of extensions: 3512181
Number of successful extensions: 111593
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111063
Number of HSP's gapped (non-prelim): 530
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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