>gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds
          Length = 3143

 Score =  476 bits (240), Expect = e-131
 Identities = 299/316 (94%), Gaps = 2/316 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   atgatactgcaacattcaattctccctggctgaaataggttacatatacacccaaaccga 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3103 atgatactgcaacattcaattctccctggctgaaataggttacatatacacccaaaccga 3044

                                                                        
Query: 147  caacaacaggtggatctccttgctaccaataccaaaccgagcatagatagatgagcatcc 206
            |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 3043 caacaacaggtggacctccttgctacca-tagcaaaccgagcatagatagatgagcatcc 2985

                                                                        
Query: 207  ctctataaatacaagcacaaagaccggagcagatctccctgccgcttttgtggataacaa 266
            |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 2984 ctctataaatacaatcacaaagaccagagcagatctccctgccgcttttgtggatagcaa 2925

                                                                        
Query: 267  gtacccatatacacattccgcatattagcttaactgaattggacgagcgatgctggcgtc 326
            ||| ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||
Sbjct: 2924 gtatccatatacacattccgcatattagcttaactgagttggacgagcaacgctggcgtc 2865

                                                                        
Query: 327  atgagatttcactccgatggagcaattgctcgcctacgctcagtcgctcgtttgtagata 386
            |||||||||| |||| | ||||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 2864 atgagatttcgctccaacggagcaattgctcgcctacgctca-acgctcatttgtagata 2806

                            
Query: 387  tctgggcagtgaatag 402
            ||||||| ||||||||
Sbjct: 2805 tctgggcggtgaatag 2790

>gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 623

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 10  atgtatatagacacgtcttagcgtgtttgttcactc 45
           |||||||||||||||| |||| | ||||||||||||
Sbjct: 349 atgtatatagacacgttttagtgcgtttgttcactc 314

>gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 664

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 10  atgtatatagacacgtcttagcgtgtttgttcactc 45
           |||||||||||||||| |||| | ||||||||||||
Sbjct: 275 atgtatatagacacgttttagtgcgtttgttcactc 310

>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    actgcaacattcaattctccc 112
             |||||||||||||||||||||
Sbjct: 80340 actgcaacattcaattctccc 80320

>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     cgcttttgtggataacaagta 269
               |||||||||||||||||||||
Sbjct: 1369291 cgcttttgtggataacaagta 1369311

>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete
            sequence
          Length = 219854

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 189  atagatagatgagcatccctc 209
            |||||||||||||||||||||
Sbjct: 6522 atagatagatgagcatccctc 6502

>dbj|AP004913.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072a,
            complete sequence
          Length = 100740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 275  atacacattccgcatattagcttaa 299
            |||||||||||||||||||| ||||
Sbjct: 4022 atacacattccgcatattagattaa 4046

>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE
          Length = 119528

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  cctctataaatacaagcaca 225
            ||||||||||||||||||||
Sbjct: 9634 cctctataaatacaagcaca 9615

>gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete sequence
          Length = 85905

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   cctctataaatacaagcaca 225
             ||||||||||||||||||||
Sbjct: 64740 cctctataaatacaagcaca 64759



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   cctctataaatacaagcaca 225
             ||||||||||||||||||||
Sbjct: 55200 cctctataaatacaagcaca 55219

>dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox protein, complete cds
          Length = 9086

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 10   atgtatatagacacgtcttagcgtgtttgttcactc 45
            |||||||||||||| | | || ||||||||||||||
Sbjct: 7933 atgtatatagacacatttgagtgtgtttgttcactc 7968

>gb|AC004827.1|AC004827 Homo sapiens PAC clone RP1-44L15 from Xq23, complete sequence
          Length = 129690

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    cgtgtttgttcactctatat 50
             ||||||||||||||||||||
Sbjct: 24961 cgtgtttgttcactctatat 24980

>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE
          Length = 106640

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    cctctataaatacaagcaca 225
              ||||||||||||||||||||
Sbjct: 105678 cctctataaatacaagcaca 105659



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   cctctataaatacaagcaca 225
             ||||||||||||||||||||
Sbjct: 96032 cctctataaatacaagcaca 96013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,765,452
Number of Sequences: 3902068
Number of extensions: 2765452
Number of successful extensions: 39678
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39653
Number of HSP's gapped (non-prelim): 23
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)