>PRIA_CHLTR (O84783) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 753

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 236 DHTERKNARLHTLIDYDLDNEVDACAL-PCPKEKQNALLFYSLL 108
           D+T ++  R+HTLI  +LD++     + PC   K   L  Y  L
Sbjct: 671 DYTLKETQRVHTLIKQNLDSQASLMEISPCGHFKVKDLFHYQFL 714

>TOP2_CANAL (P87078) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1461

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -2

Query: 311  RRVMTSNKQQGGREEAAVEEN*VQRDHTERKNARLHTLIDYDLDNEVDACALPCPKEKQN 132
            R   T+ K Q   ++  VE         E+K+     ++  +  NE  A +   PKEK +
Sbjct: 1259 RAKATATKDQPNNKKVKVEPK-------EKKSTSAKPIVKKEASNEPQASSSSKPKEKDD 1311

Query: 131  ALLFYS 114
             L F+S
Sbjct: 1312 ILSFFS 1317

>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -2

Query: 179 NEVDACALPCPKEKQ-----NALLFYSLLCTSVTSS 87
           NE+ + ALP  KE+      NAL  Y   C +VTSS
Sbjct: 844 NEIPSKALPLVKEQATNSCINALYAYRKFCATVTSS 879

>LGRD_BREPA (Q70LM4) Linear gramicidin synthetase subunit D [Includes:|
            ATP-dependent tryptophan adenylase (TrpA) (Tryptophan
            activase); ATP-dependent D-leucine adenylase (D-LeuA)
            (D-Leucine activase); Leucine racemase [ATP-hydrolyzing]
            (EC 5.1.1.-); ATP-d
          Length = 5085

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 145  FGHGRAHASTSLSRS*SINVCSRAFFRSVWSLWT*FSSTAASSLPPCCLLLVMTRL 312
            F H RA+  T+  R+    +   AF  SVW +W   +  A   LP   + LV  +L
Sbjct: 1690 FWHQRAYDVTATDRA--SQIAGTAFDASVWEIWPYVTKGATLYLPEEEIRLVPEKL 1743


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,854,269
Number of Sequences: 219361
Number of extensions: 795509
Number of successful extensions: 1739
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)