Clone Name | rbastl11f06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PMTY_SCHPO (O42933) Probable dolichyl-phosphate-mannose--protein... | 30 | 4.2 | 2 | UD19_HUMAN (O60656) UDP-glucuronosyltransferase 1-9 precursor (E... | 30 | 4.2 | 3 | UD12_HUMAN (P36509) UDP-glucuronosyltransferase 1-2 precursor (E... | 30 | 4.2 | 4 | ISPH2_RHOPA (Q6N1Y1) 4-hydroxy-3-methylbut-2-enyl diphosphate re... | 28 | 9.4 |
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>PMTY_SCHPO (O42933) Probable dolichyl-phosphate-mannose--protein| mannosyltransferase C16C6.09 (EC 2.4.1.109) Length = 778 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -2 Query: 149 FFPSDLFFFKITEIVHYVLASFSSSYQLFLHNYYSVYL 36 F+ S +FF+ +T + HY L F QLFLH+Y +L Sbjct: 644 FYRSTMFFY-MTYVFHY-LPFFIMGRQLFLHHYLPAHL 679
>UD19_HUMAN (O60656) UDP-glucuronosyltransferase 1-9 precursor (EC 2.4.1.17)| (UDP-glucuronosyltransferase 1A9) (UDPGT) (UGT1*9) (UGT1-9) (UGT1.9) (UGT-1I) (UGT1I) Length = 530 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -1 Query: 177 KKVLEHMRIFFSF*SIFLQNYRNCPLCISEFFFFLPTVFTQLLQC 43 KK++E+++ SF ++FL + NC L ++++F VF + + C Sbjct: 131 KKLVEYLKES-SFDAVFLDPFDNCGLIVAKYFSLPSVVFARGILC 174
>UD12_HUMAN (P36509) UDP-glucuronosyltransferase 1-2 precursor (EC 2.4.1.17)| (UDP-glucuronosyltransferase 1A2) (UDPGT) (UGT1*2) (UGT1-02) (UGT1.2) (UGT-1B) (UGT1B) (HLUGP4) Length = 530 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -1 Query: 177 KKVLEHMRIFFSF*SIFLQNYRNCPLCISEFFFFLPTVFTQLLQC 43 KK++E+++ SF ++FL + NC L ++++F VF + + C Sbjct: 131 KKLVEYLKES-SFDAVFLDPFDNCGLIVAKYFSLPSVVFARGILC 174
>ISPH2_RHOPA (Q6N1Y1) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 (EC| 1.17.1.2) Length = 320 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = +3 Query: 267 AACAQSTKVTRTRSSHHFNRARAGSILLPGSFYHPDVV 380 A C TKV R ++ HF R R ILL G +HP+VV Sbjct: 101 ATCPLVTKVHR-EAAIHFKRGR--EILLIGHSHHPEVV 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,087,143 Number of Sequences: 219361 Number of extensions: 1297726 Number of successful extensions: 2852 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2852 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)