>gb|AY108410.1| Zea mays PCO086236 mRNA sequence
          Length = 496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 415 agggttcttattaatcaccacgacaaatcaataaataacc 454
           ||||||||||||||| ||||  ||||||||||||||||||
Sbjct: 322 agggttcttattaattaccagaacaaatcaataaataacc 283

>ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative transcription factor
            (OSJNBa0076F20.5), mRNA
          Length = 3478

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 3    aagaacagcaagaatataagatatagtatgtcacaagtatacactgtaa 51
            ||||| ||||||||| ||| ||||| |||||| | ||||||||||||||
Sbjct: 3473 aagaatagcaagaatgtaacatataatatgtcgcgagtatacactgtaa 3425

>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 3     aagaacagcaagaatataagatatagtatgtcacaagtatacactgtaa 51
             ||||| ||||||||| ||| ||||| |||||| | ||||||||||||||
Sbjct: 37714 aagaatagcaagaatgtaacatataatatgtcgcgagtatacactgtaa 37762

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 3        aagaacagcaagaatataagatatagtatgtcacaagtatacactgtaa 51
                ||||| ||||||||| ||| ||||| |||||| | ||||||||||||||
Sbjct: 19409848 aagaatagcaagaatgtaacatataatatgtcgcgagtatacactgtaa 19409896

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 3        aagaacagcaagaatataagatatagtatgtcacaagtatacactgtaa 51
                ||||| ||||||||| ||| ||||| |||||| | ||||||||||||||
Sbjct: 19421124 aagaatagcaagaatgtaacatataatatgtcgcgagtatacactgtaa 19421172

>gb|BC085719.1| Rattus norvegicus ubiquitin specific peptidase 2, mRNA (cDNA clone
            MGC:93284 IMAGE:7193298), complete cds
          Length = 2071

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 251  acactgtagagcagtagccgca 272
            ||||||||||||||||||||||
Sbjct: 1443 acactgtagagcagtagccgca 1422

>ref|NM_053774.2| Rattus norvegicus ubiquitin specific peptidase 2 (Usp2), mRNA
          Length = 2095

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 251  acactgtagagcagtagccgca 272
            ||||||||||||||||||||||
Sbjct: 1469 acactgtagagcagtagccgca 1448

>gb|AF106659.1| Rattus norvegicus deubiquitinating enzyme Ubp69 (ubp69) mRNA,
            complete cds
          Length = 2095

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 251  acactgtagagcagtagccgca 272
            ||||||||||||||||||||||
Sbjct: 1469 acactgtagagcagtagccgca 1448

>gb|AF106658.1| Rattus norvegicus deubiquitinating enzyme Ubp45 (ubp45) mRNA,
           complete cds
          Length = 1505

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 251 acactgtagagcagtagccgca 272
           ||||||||||||||||||||||
Sbjct: 897 acactgtagagcagtagccgca 876

>gb|AF202454.1|AF202454 Rattus norvegicus testis ubiquitin specific processing protease
           mRNA, complete cds
          Length = 1191

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 251 acactgtagagcagtagccgca 272
           ||||||||||||||||||||||
Sbjct: 676 acactgtagagcagtagccgca 655

>gb|AF202453.1|AF202453 Rattus norvegicus ubiquitin specific processing protease mRNA,
            complete cds
          Length = 1857

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 251  acactgtagagcagtagccgca 272
            ||||||||||||||||||||||
Sbjct: 1342 acactgtagagcagtagccgca 1321

>gb|AC163996.6| Mus musculus chromosome 8, clone RP23-6B9, complete sequence
          Length = 206641

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 114   ggtaattttgaagaaaaatagatca 138
             ||||||||| |||||||||||||||
Sbjct: 80858 ggtaattttcaagaaaaatagatca 80834

>gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosome 9, complete sequence
          Length = 203466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    agttggtaagaagaagaaaaa 87
             |||||||||||||||||||||
Sbjct: 93330 agttggtaagaagaagaaaaa 93310

>emb|Z81497.1|CEF10C2 Caenorhabditis elegans Cosmid F10C2, complete sequence
          Length = 35804

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   tgaagaaaaatagatcagaag 142
             |||||||||||||||||||||
Sbjct: 11221 tgaagaaaaatagatcagaag 11201

>emb|AL451063.4| Human DNA sequence from clone RP11-267N12 on chromosome 1 Contains the
             5' end of the RGS5 gene for regulator of G-protein
             signalling 5, the 3' ends of two novel genes and a
             CCA-adding tRNA nucleotidyl transferase 1 (TRNT1)
             pseudogene, complete sequence
          Length = 66608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    tgtcacaagtatacactgtaa 51
             |||||||||||||||||||||
Sbjct: 31748 tgtcacaagtatacactgtaa 31728

>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 192749

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 443   caataaataaccagaccacca 463
             |||||||||||||||||||||
Sbjct: 53053 caataaataaccagaccacca 53073

>gb|AC154041.1| Drosophila melanogaster clone BACR43N11, complete sequence
          Length = 157286

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     taaaaacagttggtaagaag 79
              ||||||||||||||||||||
Sbjct: 125659 taaaaacagttggtaagaag 125640

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    ccgagcgcgagctggatcga 342
              ||||||||||||||||||||
Sbjct: 511885 ccgagcgcgagctggatcga 511904

>ref|XM_519994.1| PREDICTED: Pan troglodytes similar to Cytochrome P450 11B2,
            mitochondrial precursor (CYPXIB2) (P-450Aldo)
            (Aldosterone synthase) (ALDOS) (Aldosterone-synthesizing
            enzyme) (Steroid 18-hydroxylase) (P-450C18) (LOC464437),
            mRNA
          Length = 3448

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  cagcaccttcttcctcatggcctg 189
            ||||||||||||||||| ||||||
Sbjct: 1533 cagcaccttcttcctcagggcctg 1510

>gb|AC147004.2| Homo sapiens chromosome 8, clone RP13-895A16, complete sequence
          Length = 109297

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    cagcaccttcttcctcatggcctg 189
              ||||||||||||||||| ||||||
Sbjct: 101122 cagcaccttcttcctcagggcctg 101099

>emb|Z74031.1|CEF32D8 Caenorhabditis elegans Cosmid F32D8, complete sequence
          Length = 39519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  tcgatcctttttcatttttc 222
            ||||||||||||||||||||
Sbjct: 4293 tcgatcctttttcatttttc 4274

>gb|DQ366716.1| Uncultured Prochlorococcus marinus clone ASNC2388 genomic sequence
          Length = 37730

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    aacagttggtaagaagaagaaaaa 87
             |||| |||||||||||||||||||
Sbjct: 29040 aacatttggtaagaagaagaaaaa 29063

>emb|AL390876.19| Human DNA sequence from clone RP11-394D2 on chromosome 9 Contains an
              actin, beta (ACTB) pseudogene, complete sequence
          Length = 185571

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     tggtaagaagaagaaaaact 89
              ||||||||||||||||||||
Sbjct: 155962 tggtaagaagaagaaaaact 155943

>emb|X94443.1|VRPECMEST V.radiata mRNA for pectinmethylesterase
          Length = 1111

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  ttggtaagaagaagaaaaac 88
           ||||||||||||||||||||
Sbjct: 152 ttggtaagaagaagaaaaac 171

>gb|AC126775.2| Homo sapiens chromosome 5 clone RP11-681L6, complete sequence
          Length = 62011

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   aagaaaaatagatcagaagg 143
             ||||||||||||||||||||
Sbjct: 38034 aagaaaaatagatcagaagg 38015

>gb|AC010575.5| Drosophila melanogaster 3L BAC RP98-5M7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 172401

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    taaaaacagttggtaagaag 79
             ||||||||||||||||||||
Sbjct: 55442 taaaaacagttggtaagaag 55423

>gb|AC091727.2|AC091727 Takifugu rubripes clone 250A8, complete sequence
          Length = 58366

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tcggtaattttgaagaaaaa 131
             ||||||||||||||||||||
Sbjct: 12249 tcggtaattttgaagaaaaa 12268

>gb|AC008701.6| Homo sapiens chromosome 5 clone CTB-75N16, complete sequence
          Length = 101577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aagaaaaatagatcagaagg 143
             ||||||||||||||||||||
Sbjct: 89520 aagaaaaatagatcagaagg 89539

>gb|AC025519.10|AC025519 Homo sapiens, clone RP11-484J3, complete sequence
          Length = 171464

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   gatcctttttcatttttcac 224
             ||||||||||||||||||||
Sbjct: 73951 gatcctttttcatttttcac 73932

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    tttttcaccgttccattgca 236
              ||||||||||||||||||||
Sbjct: 992514 tttttcaccgttccattgca 992533

>dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G06, full
            insert sequence
          Length = 3272

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  gtagagcagtagccgcatgcgccc 279
            ||||||||||||||||| ||||||
Sbjct: 2505 gtagagcagtagccgcaggcgccc 2482

>ref|XM_309874.2| Anopheles gambiae str. PEST ENSANGP00000018264
           (ENSANGG00000015775), partial mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 tatgctccagcaccttcttc 178
           ||||||||||||||||||||
Sbjct: 34  tatgctccagcaccttcttc 15

>gb|BT024037.1| Zea mays clone EL01N0427C11 mRNA sequence
          Length = 1826

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 165 ccagcaccttcttcctcatggcctgcag 192
           |||||||||||||||  |||||||||||
Sbjct: 978 ccagcaccttcttcccgatggcctgcag 951

>emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-860P2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201587

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   acacgctcttctcatcattt 319
             ||||||||||||||||||||
Sbjct: 45107 acacgctcttctcatcattt 45088

>gb|AE003481.3| Drosophila melanogaster chromosome 3L, section 15 of 83 of the complete
              sequence
          Length = 315988

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     taaaaacagttggtaagaag 79
              ||||||||||||||||||||
Sbjct: 171862 taaaaacagttggtaagaag 171843

>gb|BC088723.1| Xenopus laevis hypothetical LOC496249, mRNA (cDNA clone MGC:99374
           IMAGE:7205306), complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 tccgcatatgctccagcacc 172
           ||||||||||||||||||||
Sbjct: 762 tccgcatatgctccagcacc 743

>gb|M32880.1|HUMCYPBX2 Human steroid 11-beta-hydroxylase-like-enzyme (CYP11B2) gene, exons
           3 - 8
          Length = 3088

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 cagcaccttcttcctcatggcctg 189
           ||||||||||||||||| ||||||
Sbjct: 496 cagcaccttcttcctcagggcctg 473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,660,383
Number of Sequences: 3902068
Number of extensions: 5660383
Number of successful extensions: 138471
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138237
Number of HSP's gapped (non-prelim): 234
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)