Clone Name | rbastl11f03 |
---|---|
Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 103 bits (257), Expect = 1e-22 Identities = 51/57 (89%), Positives = 51/57 (89%), Gaps = 5/57 (8%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----GGDPTDEKMVMEMGIPNSISI 146 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS GDPTDEKMVMEMGIPNSISI Sbjct: 880 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 85.5 bits (210), Expect = 3e-17 Identities = 39/52 (75%), Positives = 43/52 (82%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I EQV+EWN D R+NRHGAG+VPYVLLRP G+P D K VMEMGIPNSISI Sbjct: 881 IAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 47.4 bits (111), Expect = 9e-06 Identities = 26/48 (54%), Positives = 31/48 (64%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 +D NN+P+ KNR GAG+VPY LL+ P E V GIPNSISI Sbjct: 854 IDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 45.1 bits (105), Expect = 5e-05 Identities = 21/50 (42%), Positives = 32/50 (64%) Frame = -3 Query: 295 EQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 E+++ N DP R+NR GAG++PY L+ PS G + G+PNS++I Sbjct: 855 EEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNSVTI 899
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 42.7 bits (99), Expect = 2e-04 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEK--MVMEMGIPNSISI 146 I ++ + N + KNR+G +PY+LL P+ D T EK + MGIPNSISI Sbjct: 824 IENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 40.8 bits (94), Expect = 9e-04 Identities = 24/50 (48%), Positives = 29/50 (58%) Frame = -3 Query: 295 EQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 E ++ N D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 874 ETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGD-PTDEKMVMEMGIPNSISI 146 I +V N DP RKNR G PY LL P+ D D + GIPNSISI Sbjct: 818 IESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKM-VMEMGIPNSISI 146 I +V N+DP+ KNR+G PY+LL P+ D + GIPNSISI Sbjct: 810 IESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I E++ + NND +NR+G +PY LL PS E+ + GIPNSISI Sbjct: 820 IEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNSISI 866
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 39.7 bits (91), Expect = 0.002 Identities = 24/48 (50%), Positives = 29/48 (60%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 +DE N + KNR GAG+V Y LL+ PT E V MG+P SISI Sbjct: 854 IDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGVPYSISI 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 39.7 bits (91), Expect = 0.002 Identities = 24/52 (46%), Positives = 29/52 (55%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I + +DE N+D KNR G +PY LL PS E V GIPNS+SI Sbjct: 813 IEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNSVSI 859
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 +D N D KNR GAG++PY L++ P + V MGIPNS SI Sbjct: 882 IDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 +D N D KNR GAG++PY L++ P + V MGIPNS SI Sbjct: 899 IDGRNKDRKLKNRCGAGILPYQLMK-----PFSDAGVTGMGIPNSTSI 941
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I +++ + NND +NRHG +PY LL PS ++ + GIPNSISI Sbjct: 815 IEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPNSISI 861
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 37.7 bits (86), Expect = 0.007 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -3 Query: 277 NNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKM-VMEMGIPNSISI 146 N D KNR+G PY+LL P+ D T + GIPNSISI Sbjct: 822 NGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 37.4 bits (85), Expect = 0.010 Identities = 22/52 (42%), Positives = 30/52 (57%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I +++ E N D +NR+G +PY LL PS E+ + GIPNSISI Sbjct: 807 IEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPNSISI 853
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 36.2 bits (82), Expect = 0.022 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I ++ E NND +NR G +PY LL PS ++ + GIPNSISI Sbjct: 811 IENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPNSISI 857
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 35.0 bits (79), Expect = 0.048 Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = -3 Query: 301 IVEQVDEWNNDPDRK-NRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I E++ NNDP + NR G +PY LL PS E+ + GIPNSISI Sbjct: 792 IEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 35.0 bits (79), Expect = 0.048 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTD-EKMVMEMGIPNSISI 146 I +V N DP KNR G PY L+ P+ D + + GIPNSISI Sbjct: 811 IESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 35.0 bits (79), Expect = 0.048 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -3 Query: 292 QVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 +++ N+DP +NR G +PY LL S E+ + GIPNSISI Sbjct: 821 KINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPNSISI 864
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 34.7 bits (78), Expect = 0.063 Identities = 22/52 (42%), Positives = 26/52 (50%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I E++ NND NR G +PY LL P+ T GIPNSISI Sbjct: 820 IEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 34.7 bits (78), Expect = 0.063 Identities = 20/44 (45%), Positives = 25/44 (56%) Frame = -3 Query: 277 NNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 NNDP +R G +PY LL PS ++ + GIPNSISI Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNSISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 33.1 bits (74), Expect = 0.18 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = -3 Query: 277 NNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 N+ KNR G VPY LL P T E+ + GIPNS+SI Sbjct: 821 NSHKSWKNRSGPVNVPYTLLFP-----TSEEGLTGKGIPNSVSI 859
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 33.1 bits (74), Expect = 0.18 Identities = 19/52 (36%), Positives = 30/52 (57%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I E++ N D +NR+G +PY +L P+ +++ + GIPNSISI Sbjct: 815 IEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSISI 862
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 32.0 bits (71), Expect = 0.41 Identities = 21/52 (40%), Positives = 26/52 (50%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I +Q+ + N D NR G PY LL PT E + GIPNS+SI Sbjct: 815 IEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNSVSI 861
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.53 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 299 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 141 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSGGDPTDEKMVMEMGIPNSISI 146 I +Q+ + N + NR G PY LL P T E + GIPNS+SI Sbjct: 814 IEKQIMQRNGNNILTNRTGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 860
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.5 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYV 224 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 266 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 162 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III| Length = 547 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +3 Query: 201 SPPDGLSSTYGTMPAPCRFFRSGSLFHSSTC 293 +P +G+S+ PC+FFR+G+ C Sbjct: 31 TPENGVSTVKNLQHVPCKFFRNGTCTAGENC 61
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 301 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 209 I +++ + NND +NR G +PY LL PS Sbjct: 701 IEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 82 WPGGGYNGNEHQIIIKGHDDIYI 14 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 280 WNNDPDRKNRHGAGMVPYVLLRPSGGD 200 WN P H AG +PYVL P+ D Sbjct: 730 WNPQPGVYPPHAAGHLPYVLYDPTATD 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,955,491 Number of Sequences: 219361 Number of extensions: 1036112 Number of successful extensions: 2791 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2768 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)