>RT04_ACACA (P46755) Mitochondrial ribosomal protein S4|
          Length = 374

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 211 FLRGRFCTASCSNIWTPPPLVIFPFV*YCC*KFMHRFLFFY 89
           F++  +C +SCSNI+T   L+ FP +       ++R L FY
Sbjct: 133 FIKHNYCLSSCSNIYTQTKLLYFPII------SVNRGLVFY 167

>SECA_ODOSI (P49649) Preprotein translocase secA subunit|
          Length = 888

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 267 GWHDIGHFT--SKHSADMYCVFSVEGFVQRHVVIY 169
           GW   G     S++  D Y +F   G V RH+VIY
Sbjct: 846 GWRKYGQRNPLSEYKEDAYKLFKYRGIVTRHLVIY 880

>KPC4_DROME (P83099) Putative protein kinase C, delta type homolog (EC|
           2.7.11.13)
          Length = 643

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = -1

Query: 192 VQRHVVIYGRPHPWLFSLLCSTAAKSSCTVFFSFTLGRHLL-------PFSLNNARFFYA 34
           ++R V+  G  HP+L  L C+   +S       +  G  L+        FS   ARF+ A
Sbjct: 362 IERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGA 421

Query: 33  TVV 25
            ++
Sbjct: 422 EII 424

>REPL_BPP1 (P19654) Replication protein repL|
          Length = 281

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 104 TVHELLAAVLHKRENNQGWGRP 169
           TV+E L AVL K ++N+ WG P
Sbjct: 255 TVNEALNAVLAKNKDNEQWGIP 276


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,324,155
Number of Sequences: 219361
Number of extensions: 944869
Number of successful extensions: 2016
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)