Clone Name | rbastl11e09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaatacatg 148 |||||||||||||||||||||| Sbjct: 47339 atagaatagaatagaatacatg 47360 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 47257 acatagaatagaatagaata 47276
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaatacatg 148 |||||||||||||||||||||| Sbjct: 144048 atagaatagaatagaatacatg 144069 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 143971 acatagaatagaatagaata 143990
>gb|AC097537.2| Homo sapiens BAC clone RP11-806K15 from 4, complete sequence Length = 138574 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaatacatg 148 |||||||||||||||||||||| Sbjct: 14462 atagaatagaatagaatacatg 14441
>gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, complete sequence Length = 188821 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaatacat 147 ||||||||||||||||||||| Sbjct: 148816 atagaatagaatagaatacat 148836 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 148789 acatagaatagaatagaata 148808
>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence Length = 225231 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaatacat 147 ||||||||||||||||||||| Sbjct: 113486 atagaatagaatagaatacat 113506 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 113459 acatagaatagaatagaata 113478
>emb|CR788251.13| Zebrafish DNA sequence from clone DKEY-231F24 in linkage group 13, complete sequence Length = 150523 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ttgctgctggggttgccaatg 191 ||||||||||||||||||||| Sbjct: 829 ttgctgctggggttgccaatg 849
>ref|NM_114434.1| Arabidopsis thaliana transporter AT3G45650 mRNA, complete cds Length = 1677 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 641 acagacagaccaaacccaag 622
>gb|AC167468.2| Mus musculus BAC clone RP23-163J2 from chromosome 10, complete sequence Length = 219954 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ccccactggaaccagccaat 239 |||||||||||||||||||| Sbjct: 68032 ccccactggaaccagccaat 68051
>ref|NM_178687.2| Mus musculus CD226 antigen (Cd226), transcript variant 1, mRNA Length = 2487 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 2437 acatagaatagaatagaata 2456
>ref|NM_001039148.1| Mus musculus CD226 antigen (Cd226), transcript variant 3, mRNA Length = 2273 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 2223 acatagaatagaatagaata 2242
>ref|NM_001039149.1| Mus musculus CD226 antigen (Cd226), transcript variant 2, mRNA Length = 2148 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 2098 acatagaatagaatagaata 2117
>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence Length = 217116 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 90111 acatagaatagaatagaata 90092
>emb|CR628327.9| Zebrafish DNA sequence from clone DKEY-246C17 in linkage group 17, complete sequence Length = 111757 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 33685 atagaatagaatagaataca 33666
>emb|BX927376.15| Zebrafish DNA sequence from clone CH211-227M13 in linkage group 22, complete sequence Length = 158803 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 155445 atagaatagaatagaataca 155426
>gb|AC121581.3| Mus musculus BAC clone RP23-256O22 from chromosome 3, complete sequence Length = 159314 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 126148 atagaatagaatagaataca 126129
>gb|AF521697.1| Mus musculus serine protease inhibitor EIA (Serpinb1) gene, complete cds Length = 15106 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 6741 acatagaatagaatagaata 6722
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 88358 acatagaatagaatagaata 88377
>gb|AC092265.3| Homo sapiens chromosome 1 clone RP4-656G21, complete sequence Length = 129231 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 111941 atagaatagaatagaataca 111922
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 73563 acatagaatagaatagaata 73582
>gb|AF469113.1| Helicobacter pylori plasmid pHel5 complete sequence Length = 18291 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 16661 acatagaatagaatagaata 16680
>emb|AL596115.9| Human DNA sequence from clone RP11-358M4 on chromosome 10, complete sequence Length = 29257 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aaaagaactctttgaatgtt 172 |||||||||||||||||||| Sbjct: 7302 aaaagaactctttgaatgtt 7321
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gggttgccaatggagcgcga 199 |||||||||||||||||||| Sbjct: 4265450 gggttgccaatggagcgcga 4265431
>emb|CR848759.4| Zebrafish DNA sequence from clone CH211-229D2 in linkage group 15, complete sequence Length = 167536 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 87353 atagaatagaatagaataca 87372
>gb|AY090981.1| Arabidopsis thaliana At3g45640 mRNA sequence Length = 3109 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 1889 acagacagaccaaacccaag 1870
>emb|X17375.2|MISOLSUR Scenedesmus obliquus complete mitochondrial genome Length = 42781 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 23939 atagaatagaatagaataca 23958 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 23872 atagaatagaatagaataca 23891 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 23852 atagaatagaatagaataca 23871 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 2292 atagaatagaatagaataca 2311 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 2181 atagaatagaatagaataca 2200 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 2069 atagaatagaatagaataca 2088 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 1901 atagaatagaatagaataca 1920
>gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosome 10, complete sequence Length = 165624 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ccccactggaaccagccaat 239 |||||||||||||||||||| Sbjct: 73415 ccccactggaaccagccaat 73396
>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a novel gene, the Pafah1b1 gene for platelet-activating factor acetylhydrolase isoform 1b beta1 subunit, the 5' end of a novel gene and two CpG islands, complete sequence Length = 137908 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 46417 acatagaatagaatagaata 46398
>emb|AL157735.2|ATT6D9 Arabidopsis thaliana DNA chromosome 3, BAC clone T6D9 Length = 79716 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 10327 acagacagaccaaacccaag 10308
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 102565 acagacagaccaaacccaag 102546
>emb|AJ511786.1|FRU511786 Takifugu rubripes partial junDLb gene for JunDLb Length = 3150 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 543 acatagaatagaatagaata 524
>emb|BX470119.17| Zebrafish DNA sequence from clone CH211-225L4 in linkage group 20, complete sequence Length = 106989 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 17609 acatagaatagaatagaata 17628
>emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on chromosome 13 Contains the gene for a novel protein similar to myosin, light polypeptide kinase 2 Mylk2, a novel gene, the Wrnip gene for Werner syndrome homolog (human) interacting protein, the Serpinb1a gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1a, a Serpinb1 pseudogene and a CpG island, complete sequence Length = 190673 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 162930 acatagaatagaatagaata 162949
>emb|CR812483.4| Zebrafish DNA sequence from clone CH211-178I23 in linkage group 20, complete sequence Length = 22512 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 4904 acatagaatagaatagaata 4885
>emb|BX511191.4| Zebrafish DNA sequence from clone DKEY-202C5 in linkage group 8, complete sequence Length = 79887 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 72310 atagaatagaatagaataca 72291
>gb|AC113429.2| Homo sapiens chromosome 5 clone RP11-775H7, complete sequence Length = 10528 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 catagaatagaatagaatac 145 |||||||||||||||||||| Sbjct: 7084 catagaatagaatagaatac 7065
>emb|BX324211.9| Zebrafish DNA sequence from clone CH211-39L18 in linkage group 2, complete sequence Length = 91947 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 86601 atagaatagaatagaataca 86582
>emb|AL772373.23| Zebrafish DNA sequence from clone CH211-143A22 in linkage group 14, complete sequence Length = 185265 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 42422 acatagaatagaatagaata 42403
>gb|AF204057.1| Scenedesmus obliquus strain UTEX 78 mitochondrion, complete genome Length = 42919 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 39899 atagaatagaatagaataca 39918 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 39832 atagaatagaatagaataca 39851 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 39812 atagaatagaatagaataca 39831 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 18111 atagaatagaatagaataca 18130 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 18000 atagaatagaatagaataca 18019 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 17888 atagaatagaatagaataca 17907 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 17720 atagaatagaatagaataca 17739
>gb|AC114612.13| Mus musculus chromosome 7, clone RP24-80O23, complete sequence Length = 189471 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 27453 atagaatagaatagaataca 27472
>emb|BX294669.8| Zebrafish DNA sequence from clone CH211-134K13 in linkage group 9, complete sequence Length = 180734 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 173239 atagaatagaatagaataca 173220
>gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, region 53D-53E, BAC clone BACR36P23, complete sequence Length = 198390 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 56101 atagaatagaatagaataca 56082
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caccaaaaccccaaaaaagc 219 |||||||||||||||||||| Sbjct: 15353950 caccaaaaccccaaaaaagc 15353931
>emb|BX823318.1|CNS0A7CL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1922 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 770 acagacagaccaaacccaag 751
>emb|BX824692.1|CNS0A5LZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1824 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acagacagaccaaacccaag 274 |||||||||||||||||||| Sbjct: 665 acagacagaccaaacccaag 646
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 28985 acatagaatagaatagaata 28966
>ref|NM_205390.1| Gallus gallus calcium-binding protein (P22), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 accccaaaaaagcccccact 226 |||||||||||||||||||| Sbjct: 1370 accccaaaaaagcccccact 1389
>gb|AC068609.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-98L5, complete sequence Length = 192263 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 97654 atagaatagaatagaataca 97635
>emb|AL954709.15| Zebrafish DNA sequence from clone CH211-142N21 in linkage group 7, complete sequence Length = 162309 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 40185 atagaatagaatagaataca 40204 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 39863 atagaatagaatagaataca 39882
>gb|AF200741.1|AF200741 Brachyspira pilosicoli galactose/glucose-binding protein (mglB) gene, complete cds Length = 1637 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tctttgaatgttgctgctgg 180 |||||||||||||||||||| Sbjct: 1356 tctttgaatgttgctgctgg 1375
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caccaaaaccccaaaaaagc 219 |||||||||||||||||||| Sbjct: 139581 caccaaaaccccaaaaaagc 139562
>gb|AC155842.4| Mus musculus 6 BAC RP24-122N23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177409 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 173245 acatagaatagaatagaata 173226
>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence Length = 166286 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 106751 atagaatagaatagaataca 106732
>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22, complete sequence Length = 157470 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 2221 acatagaatagaatagaata 2202
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caccaaaaccccaaaaaagc 219 |||||||||||||||||||| Sbjct: 39526 caccaaaaccccaaaaaagc 39507
>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence Length = 205102 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 161914 atagaatagaatagaataca 161933
>emb|CR388128.18| Zebrafish DNA sequence from clone CH211-127B17 in linkage group 18, complete sequence Length = 180022 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 176084 acatagaatagaatagaata 176103
>emb|BX571837.10| Zebrafish DNA sequence from clone CH211-261O1 in linkage group 19, complete sequence Length = 190521 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 142892 atagaatagaatagaataca 142873
>gb|AC147900.2| Xenopus tropicalis clone CH216-53P23, complete sequence Length = 157316 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 89782 acatagaatagaatagaata 89763
>emb|AL592062.11| Zebrafish DNA sequence from clone XX-6CSE, complete sequence Length = 106778 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 62036 atagaatagaatagaataca 62055
>emb|AL645689.11| Zebrafish DNA sequence from clone XX-BAC7CSE, complete sequence Length = 82848 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 8856 atagaatagaatagaataca 8875
>gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44 of 73 of the complete sequence Length = 271179 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 151645 atagaatagaatagaataca 151626
>emb|AL974308.13| Zebrafish DNA sequence from clone DKEY-29P20, complete sequence Length = 180511 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 90387 acatagaatagaatagaata 90406
>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16, complete sequence Length = 166820 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 83973 atagaatagaatagaataca 83992
>dbj|AP001995.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-264E20, complete sequence Length = 96071 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 aatacatgctacaaaagaactctttgaa 168 ||||||||||||||||||| ||| |||| Sbjct: 33404 aatacatgctacaaaagaagtctatgaa 33431
>gb|AC004287.1|AC004287 Drosophila melanogaster DNA sequence (P1 DS02309 (D166)), complete sequence Length = 70841 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 28617 atagaatagaatagaataca 28598
>emb|BX004781.7| Zebrafish DNA sequence from clone CH211-149G8 in linkage group 1, complete sequence Length = 169991 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 65626 atagaatagaatagaataca 65645 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 64386 atagaatagaatagaataca 64405
>emb|BX001053.7| Mouse DNA sequence from clone RP23-199B9 on chromosome 4, complete sequence Length = 111777 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 103955 atagaatagaatagaataca 103936
>emb|CR548630.7| Zebrafish DNA sequence from clone CH211-232B12 in linkage group 11, complete sequence Length = 117408 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 68642 acatagaatagaatagaata 68661
>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence Length = 151729 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 63637 atagaatagaatagaataca 63618
>emb|AL929582.10| Zebrafish DNA sequence from clone CH211-117M12, complete sequence Length = 175577 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 39179 acatagaatagaatagaata 39198
>gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromosome unknown, complete sequence Length = 211745 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 attgttgggaacgaatcaatacaa 42 ||||||||||| |||||||||||| Sbjct: 82819 attgttgggaatgaatcaatacaa 82796
>emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chromosome 4, complete sequence Length = 236166 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 183147 acatagaatagaatagaata 183166
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atagaatagaatagaataca 146 |||||||||||||||||||| Sbjct: 1745474 atagaatagaatagaataca 1745455
>emb|AJ414549.1|CNA414549 Cephalanthus natalensis chloroplast trnT-L-F region Length = 1730 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 87 acatagaatagaatagaata 106
>emb|AJ346911.1|AFA346911 Adinauclea fagifolia chloroplast DNA for trnT-L-F region Length = 1726 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 87 acatagaatagaatagaata 106
>gb|L11171.1|CHKP22CBP Chicken calcium binding protein (P22) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 accccaaaaaagcccccact 226 |||||||||||||||||||| Sbjct: 1370 accccaaaaaagcccccact 1389
>emb|X14646.1|DMSAT01 Drosophila satellite DNA fragment 1.686-201 Length = 542 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatagaatagaatagaata 144 |||||||||||||||||||| Sbjct: 34 acatagaatagaatagaata 53 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,832,985 Number of Sequences: 3902068 Number of extensions: 2832985 Number of successful extensions: 73013 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72180 Number of HSP's gapped (non-prelim): 833 length of query: 365 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 343 effective length of database: 17,147,199,772 effective search space: 5881489521796 effective search space used: 5881489521796 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)