ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464248.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-12
2ref|XM_464247.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-12
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
4dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
5dbj|AK069161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
6gb|AY107956.1| Zea mays PCO086166 mRNA sequence 80 5e-12
7gb|AC004159.1| Homo sapiens PAC clone RP5-1057M1 from 7, complet... 44 0.25
8gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 0.98
9gb|AC146418.3| Pan troglodytes BAC clone RP43-30C17 from 7, comp... 42 0.98
10gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cance... 42 0.98
11emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chr... 42 0.98
12emb|AL355539.18| Human DNA sequence from clone RP5-1077K16 on ch... 42 0.98
13emb|AL133463.16| Human DNA sequence from clone RP11-149I18 on ch... 42 0.98
14gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromos... 42 0.98
15gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 0.98
16emb|AL121819.6|CNS01DSL Human chromosome 14 DNA sequence BAC C-3... 42 0.98
17gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome... 40 3.9
18gb|AY434674.1| Mus musculus catalase gene, 5' UTR and partial cds 40 3.9
19gb|AC005062.1| Homo sapiens BAC clone CTB-95A14 from 7, complete... 40 3.9
20emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chro... 40 3.9
21emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chrom... 40 3.9
22emb|AL441986.19| Human DNA sequence from clone RP11-349O10 on ch... 40 3.9
23emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E... 40 3.9
24emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-... 40 3.9
25emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on ch... 40 3.9
26emb|BX255878.13| Mouse DNA sequence from clone RP23-444O21 on ch... 40 3.9
27gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Ca... 40 3.9
28gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, compl... 40 3.9
29gb|AC104006.6| Homo sapiens chromosome 8, clone RP11-168F16, com... 40 3.9
30gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence 40 3.9
31emb|BX530026.5| Zebrafish DNA sequence from clone DKEY-287G12 in... 40 3.9
32gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O1... 40 3.9
33gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380... 40 3.9
34gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, comp... 40 3.9
35gb|AC008173.2| Homo sapiens BAC clone RP11-374F15 from 2, comple... 40 3.9
36gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 3.9
37emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chr... 40 3.9
38dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related... 40 3.9
39gb|AC006928.15|AC006928 Homo sapiens chromosome 4 clone C0440E08... 40 3.9
40emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-3... 40 3.9
41emb|BX470214.6| Zebrafish DNA sequence from clone DKEY-27M7 in l... 40 3.9
42gb|AC140941.1| Gallus gallus BAC clone TAM32-50C3 from chromosom... 40 3.9
43emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2... 40 3.9
44emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chro... 40 3.9 
>ref|XM_464248.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4183

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
            |||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || 
Sbjct: 4125 gacatctccctgaatcttgccatagccttcttctggatgatggttttgtagctatcacca 4066

                             
Query: 280  gctcgggcctccagcga 296
            ||| | |||||||||||
Sbjct: 4065 gcttgcgcctccagcga 4049
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>ref|XM_464247.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2787

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
            |||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || 
Sbjct: 2783 gacatctccctgaatcttgccatagccttcttctggatgatggttttgtagctatcacca 2724

                             
Query: 280  gctcgggcctccagcga 296
            ||| | |||||||||||
Sbjct: 2723 gcttgcgcctccagcga 2707
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                           
Query: 220     gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
               |||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || 
Sbjct: 3623841 gacatctccctgaatcttgccatagccttcttctggatgatggttttgtagctatcacca 3623900

                                
Query: 280     gctcgggcctccagcga 296
               ||| | |||||||||||
Sbjct: 3623901 gcttgcgcctccagcga 3623917
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                          
Query: 220    gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
              |||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || 
Sbjct: 105131 gacatctccctgaatcttgccatagccttcttctggatgatggttttgtagctatcacca 105190

                               
Query: 280    gctcgggcctccagcga 296
              ||| | |||||||||||
Sbjct: 105191 gcttgcgcctccagcga 105207
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>dbj|AK069161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A08, full
            insert sequence
          Length = 4183

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
            |||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || 
Sbjct: 4125 gacatctccctgaatcttgccatagccttcttctggatgatggttttgtagctatcacca 4066

                             
Query: 280  gctcgggcctccagcga 296
            ||| | |||||||||||
Sbjct: 4065 gcttgcgcctccagcga 4049
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>gb|AY107956.1| Zea mays PCO086166 mRNA sequence
          Length = 761

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacatctccctgaatcttgcaattgccttcttctggattatggttttatagctgtcgccg 279
           ||||||||| |||||||||| || |||||||||||||| |||||||| |||||||| |||
Sbjct: 596 gacatctccttgaatcttgccatggccttcttctggatgatggttttgtagctgtccccg 537

                   
Query: 280 gctcgggc 287
           ||| ||||
Sbjct: 536 gcttgggc 529
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>gb|AC004159.1| Homo sapiens PAC clone RP5-1057M1 from 7, complete sequence
          Length = 106039

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    caagtaggcaagaaaaagaaaa 42
             ||||||||||||||||||||||
Sbjct: 32174 caagtaggcaagaaaaagaaaa 32153
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      ttgaattacaccaagaaatat 95
               |||||||||||||||||||||
Sbjct: 1620749 ttgaattacaccaagaaatat 1620729
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>gb|AC146418.3| Pan troglodytes BAC clone RP43-30C17 from 7, complete sequence
          Length = 173505

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    caagtaggcaagaaaaagaaa 41
             |||||||||||||||||||||
Sbjct: 86904 caagtaggcaagaaaaagaaa 86884
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>gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112544

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    caagtaggcaagaaaaagaaa 41
             |||||||||||||||||||||
Sbjct: 45935 caagtaggcaagaaaaagaaa 45955
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>emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 150937

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    aagtaggcaagaaaaagaaaa 42
             |||||||||||||||||||||
Sbjct: 60864 aagtaggcaagaaaaagaaaa 60884
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>emb|AL355539.18| Human DNA sequence from clone RP5-1077K16 on chromosome 1 Contains the
             gene for protein arginine N-methyltransferase 6 (PRMT6)
             and a CpG island, complete sequence
          Length = 92293

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    caagtaggcaagaaaaagaaa 41
             |||||||||||||||||||||
Sbjct: 50354 caagtaggcaagaaaaagaaa 50374
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>emb|AL133463.16| Human DNA sequence from clone RP11-149I18 on chromosome 20 Contains the
             3' end of C20orf82 gene for a novel protein similar to
             Xenopus Isthmin protein, complete sequence
          Length = 84122

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    caagtaggcaagaaaaagaaa 41
             |||||||||||||||||||||
Sbjct: 39015 caagtaggcaagaaaaagaaa 39035
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>gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromosome 7, complete sequence
          Length = 219031

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     caagtaggcaagaaaaagaaa 41
              |||||||||||||||||||||
Sbjct: 179159 caagtaggcaagaaaaagaaa 179139
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 75      ttgaattacaccaagaaatat 95
               |||||||||||||||||||||
Sbjct: 1475280 ttgaattacaccaagaaatat 1475300
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>emb|AL121819.6|CNS01DSL Human chromosome 14 DNA sequence BAC C-3201O4 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 143883

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    caagtaggcaagaaaaagaaa 41
             |||||||||||||||||||||
Sbjct: 44150 caagtaggcaagaaaaagaaa 44130
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>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    taggcaagaaaaagaaaaca 44
             ||||||||||||||||||||
Sbjct: 69614 taggcaagaaaaagaaaaca 69595
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>gb|AY434674.1| Mus musculus catalase gene, 5' UTR and partial cds
          Length = 2711

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   gaaatatggagctagcaaga 108
            ||||||||||||||||||||
Sbjct: 1015 gaaatatggagctagcaaga 996
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>gb|AC005062.1| Homo sapiens BAC clone CTB-95A14 from 7, complete sequence
          Length = 119927

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    caagtaggcaagaaaaagaa 40
             ||||||||||||||||||||
Sbjct: 48392 caagtaggcaagaaaaagaa 48411
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>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part
              of the gene for alpha-catenin-like protein (MGC26194)
              (VR22), complete sequence
          Length = 163119

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     caagtaggcaagaaaaagaa 40
              ||||||||||||||||||||
Sbjct: 106410 caagtaggcaagaaaaagaa 106391
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>emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chromosome 1 Contains a
            novel gene (DKFZp686G0786), a calpain, small subunit 1
            (CAPNS1) pseudogene and a guanylate binding protein
            pseudogene, complete sequence
          Length = 83709

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  aagacaaaagggaaatttaa 124
            ||||||||||||||||||||
Sbjct: 4702 aagacaaaagggaaatttaa 4683
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>emb|AL441986.19| Human DNA sequence from clone RP11-349O10 on chromosome 13 Contains two
             novel genes and a peroxiredoxin 3 (PRDX3) pseudogene,
             complete sequence
          Length = 188208

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aggcaagaaaaagaaaacag 45
             ||||||||||||||||||||
Sbjct: 18082 aggcaagaaaaagaaaacag 18063
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>emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the
              C20orf21 gene for a novel protein similar to
              high-gluose-regulated protein 8 (HGRG8) and five CpG
              islands, complete sequence
          Length = 140152

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    caattgccttcttctggatt 258
              ||||||||||||||||||||
Sbjct: 119424 caattgccttcttctggatt 119443
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>emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-rich secretory protein 1 and
             PGK2 gene for testis-specific phosphoglycerate kinase
          Length = 90631

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aagtaggcaagaaaaagaaa 41
             ||||||||||||||||||||
Sbjct: 67095 aagtaggcaagaaaaagaaa 67076
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>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete
              sequence
          Length = 167058

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aagtaggcaagaaaaagaaa 41
              ||||||||||||||||||||
Sbjct: 114140 aagtaggcaagaaaaagaaa 114121
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>emb|BX255878.13| Mouse DNA sequence from clone RP23-444O21 on chromosome 11, complete
             sequence
          Length = 117480

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    aagaaaaagaaaacaggtacagag 53
             ||||||||||||| ||||||||||
Sbjct: 85183 aagaaaaagaaaagaggtacagag 85206
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>gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188105

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aggcaagaaaaagaaaacag 45
              ||||||||||||||||||||
Sbjct: 142673 aggcaagaaaaagaaaacag 142654
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>gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, complete sequence
          Length = 148933

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aggcaagaaaaagaaaacag 45
             ||||||||||||||||||||
Sbjct: 11888 aggcaagaaaaagaaaacag 11907
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>gb|AC104006.6| Homo sapiens chromosome 8, clone RP11-168F16, complete sequence
          Length = 143615

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aggcaagaaaaagaaaacag 45
             ||||||||||||||||||||
Sbjct: 99119 aggcaagaaaaagaaaacag 99138
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>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence
          Length = 169540

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aggcaagaaaaagaaaacag 45
              ||||||||||||||||||||
Sbjct: 145625 aggcaagaaaaagaaaacag 145606
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>emb|BX530026.5| Zebrafish DNA sequence from clone DKEY-287G12 in linkage group 12,
              complete sequence
          Length = 190980

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    tctggattatggttttatag 270
              ||||||||||||||||||||
Sbjct: 175458 tctggattatggttttatag 175439
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>gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O12, complete sequence
          Length = 140092

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 21    caagtaggcaagaaaaagaaaacaggtacaga 52
             |||| |||||||||||||||||  ||||||||
Sbjct: 31903 caagaaggcaagaaaaagaaaaggggtacaga 31872
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>gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380F24, complete sequence
          Length = 134640

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aagtaggcaagaaaaagaaa 41
             ||||||||||||||||||||
Sbjct: 51148 aagtaggcaagaaaaagaaa 51167
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>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence
          Length = 171048

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aagtaggcaagaaaaagaaa 41
              ||||||||||||||||||||
Sbjct: 150452 aagtaggcaagaaaaagaaa 150433
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>gb|AC008173.2| Homo sapiens BAC clone RP11-374F15 from 2, complete sequence
          Length = 193893

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     taggcaagaaaaagaaaaca 44
              ||||||||||||||||||||
Sbjct: 191289 taggcaagaaaaagaaaaca 191308
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>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 21     caagtaggcaagaaaaagaaaacaggtacaga 52
              |||| |||||||||||||||||  ||||||||
Sbjct: 128455 caagaaggcaagaaaaagaaaaggggtacaga 128424
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>emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chromosome 2, complete
             sequence
          Length = 190991

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gaaatatggagctagcaaga 108
             ||||||||||||||||||||
Sbjct: 40403 gaaatatggagctagcaaga 40422
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>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor,
             exon cluster
          Length = 249555

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    caagaaaaagaaaacaggta 48
             ||||||||||||||||||||
Sbjct: 78042 caagaaaaagaaaacaggta 78023
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>gb|AC006928.15|AC006928 Homo sapiens chromosome 4 clone C0440E08, complete sequence
          Length = 169468

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aggcaagaaaaagaaaacag 45
             ||||||||||||||||||||
Sbjct: 22681 aggcaagaaaaagaaaacag 22700
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>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193301

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     aggcaagaaaaagaaaacag 45
              ||||||||||||||||||||
Sbjct: 184028 aggcaagaaaaagaaaacag 184047
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>emb|BX470214.6| Zebrafish DNA sequence from clone DKEY-27M7 in linkage group 18, complete
              sequence
          Length = 234545

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 182    aactaattatacatgatgaaataa 205
              |||||||||| |||||||||||||
Sbjct: 172680 aactaattatccatgatgaaataa 172657
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>gb|AC140941.1| Gallus gallus BAC clone TAM32-50C3 from chromosome ul, complete
             sequence
          Length = 116265

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    agaaaaagaaaacaggtaca 50
             ||||||||||||||||||||
Sbjct: 93828 agaaaaagaaaacaggtaca 93847
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>emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2068J7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 99679

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aggcaagaaaaagaaaacag 45
             ||||||||||||||||||||
Sbjct: 95791 aggcaagaaaaagaaaacag 95772
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>emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chromosome 1, complete
             sequence
          Length = 101854

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   aagacaaaagggaaatttaa 124
             ||||||||||||||||||||
Sbjct: 39029 aagacaaaagggaaatttaa 39048


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,823,862
Number of Sequences: 3902068
Number of extensions: 3823862
Number of successful extensions: 87860
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87712
Number of HSP's gapped (non-prelim): 148
length of query: 296
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 274
effective length of database: 17,147,199,772
effective search space: 4698332737528
effective search space used: 4698332737528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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