ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYADM_HUMAN (Q96S97) Myeloid-associated differentiation marker (... 28 4.2
2MTH11_DROME (P83118) Probable G-protein coupled receptor Mth-lik... 28 5.5
3MYADM_PONPY (Q5R6H1) Myeloid-associated differentiation marker 27 9.4

>MYADM_HUMAN (Q96S97) Myeloid-associated differentiation marker (SB135)|
          Length = 322

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -2

Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVL--VNLIGF 19
           R+   SC     Y VC W+  LA+++L  +NL+ +
Sbjct: 273 RSRDVSCSRSHAYYVCAWDRRLAVAILTAINLLAY 307



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>MTH11_DROME (P83118) Probable G-protein coupled receptor Mth-like 11 precursor|
           (Protein methuselah-like 11)
          Length = 510

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVLVNLIGFYGVLSL 1
           R++   CCN  +Y +C     LAI+ L+N+I  +G+  L
Sbjct: 254 RSLHGKCCN--LYFIC-----LAITFLLNVISLFGIFEL 285



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>MYADM_PONPY (Q5R6H1) Myeloid-associated differentiation marker|
          Length = 322

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -2

Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVL--VNLIGF 19
           R+   SC     Y VC W+  LA+++L  +NL+ +
Sbjct: 273 RSRDVSCSRSHAYYVCGWDRRLAVAILTAINLLAY 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,412,928
Number of Sequences: 219361
Number of extensions: 800030
Number of successful extensions: 1371
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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