Clone Name | rbastl11e07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MYADM_HUMAN (Q96S97) Myeloid-associated differentiation marker (... | 28 | 4.2 | 2 | MTH11_DROME (P83118) Probable G-protein coupled receptor Mth-lik... | 28 | 5.5 | 3 | MYADM_PONPY (Q5R6H1) Myeloid-associated differentiation marker | 27 | 9.4 |
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>MYADM_HUMAN (Q96S97) Myeloid-associated differentiation marker (SB135)| Length = 322 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = -2 Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVL--VNLIGF 19 R+ SC Y VC W+ LA+++L +NL+ + Sbjct: 273 RSRDVSCSRSHAYYVCAWDRRLAVAILTAINLLAY 307
>MTH11_DROME (P83118) Probable G-protein coupled receptor Mth-like 11 precursor| (Protein methuselah-like 11) Length = 510 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVLVNLIGFYGVLSL 1 R++ CCN +Y +C LAI+ L+N+I +G+ L Sbjct: 254 RSLHGKCCN--LYFIC-----LAITFLLNVISLFGIFEL 285
>MYADM_PONPY (Q5R6H1) Myeloid-associated differentiation marker| Length = 322 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = -2 Query: 117 RTMATSCCNK*VYSVCCWNMYLAISVL--VNLIGF 19 R+ SC Y VC W+ LA+++L +NL+ + Sbjct: 273 RSRDVSCSRSHAYYVCGWDRRLAVAILTAINLLAY 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,412,928 Number of Sequences: 219361 Number of extensions: 800030 Number of successful extensions: 1371 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1371 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)