Clone Name | rbastl11e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... | 33 | 0.27 | 2 | LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... | 28 | 5.1 |
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>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 32.7 bits (73), Expect = 0.27 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -3 Query: 188 EKMVMEMGIPNSISI 144 EKMVMEMGIPNSISI Sbjct: 922 EKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 185 KMVMEMGIPNSISI 144 K VMEMGIPNSISI Sbjct: 919 KTVMEMGIPNSISI 932 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,825,410 Number of Sequences: 219361 Number of extensions: 579035 Number of successful extensions: 1274 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1271 length of database: 80,573,946 effective HSP length: 38 effective length of database: 72,238,228 effective search space used: 1733717472 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)