Clone Name | rbastl11e06 |
---|---|
Clone Library Name | barley_pub |
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 167 bits (84), Expect = 2e-38 Identities = 93/96 (96%) Strand = Plus / Minus Query: 23 catcgggtcctttaattataattgggggctcattcccattatacccaccgccgggccaag 82 ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 3034 catcgtgtcctttaattataatttggtgctcattcccattatacccaccgccgggccaag 2975 Query: 83 agactgaagacactcttatttacgcctagttgagtt 118 |||||||||||||||||||||||||||||||||||| Sbjct: 2974 agactgaagacactcttatttacgcctagttgagtt 2939 Score = 105 bits (53), Expect = 5e-20 Identities = 56/57 (98%) Strand = Plus / Minus Query: 134 aggcagctcaaatggagatgctgttggggatgcccatctccatcaccattttctcgt 190 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2923 aggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgt 2867
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 85.7 bits (43), Expect = 4e-14 Identities = 43/43 (100%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctccatcacc 180 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcacc 22970421 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcac 22888674
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 85.7 bits (43), Expect = 4e-14 Identities = 43/43 (100%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctccatcacc 180 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcacc 22898612 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcac 22816865
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 85.7 bits (43), Expect = 4e-14 Identities = 43/43 (100%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctccatcacc 180 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcacc 79698
>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene) Length = 3018 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcac 2778
>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full insert sequence Length = 3080 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcac 2797
>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full insert sequence Length = 2747 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcac 2304
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctccatcac 179 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcac 68170
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 47230 gagatgctgttggggatgccc 47210
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 30026445 atggagatgctgttggggatgccc 30026422 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 27803100 gagatgctgttggggatgccc 27803080
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 141 tcaaatggagatgctgttggggatgcc 167 ||||||||||||||||||||||||||| Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748
>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene) Length = 3023 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 143 aaatggagatgctgttggggatgcccatctccatcaccatttt 185 ||||||| |||||||| || |||||||||||||||||| |||| Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgtttt 2850
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 30117867 atggagatgctgttggggatgccc 30117844 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 27894424 gagatgctgttggggatgccc 27894404
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 755 gctcagatggagatgctgttggggatgccc 726
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 137 cagctcaaatggagatgctgttggggatgcccat 170 ||||||| ||||||| |||||||||||||||||| Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||||||||||||| Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2609 atggagatgctgttggggatgccc 2586
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 1082 atggagatgctgttggggatgccc 1059
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2691 atggagatgctgttggggatgccc 2668
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Plus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 81306 atggagatgctgttggggatgccc 81329
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2591 atggagatgctgttggggatgccc 2568
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2724 atggagatgctgttggggatgccc 2701
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgcccat 170 ||||| ||||||||||||||||| |||||||| Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgcccat 170 ||||| ||||||||||||||||| |||||||| Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgccc 1529
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2653 atggagatgctgttggggatgccc 2630
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 2594 gagatgctgttggggatgccc 2574
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 10793 gagatgctgttggggatgccc 10813
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||||||||||||| || |||||| Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 42.1 bits (21), Expect = 0.60 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
>gb|AY430211.1| Gnathocharax steindachneri recombination activating protein 1 (RAG1) gene, partial cds Length = 1473 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ccatctccatcaccattttctcgt 190 |||||||| ||||||||||||||| Sbjct: 673 ccatctccctcaccattttctcgt 650
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||| ||||||||||| Sbjct: 138 atggagatgctgctggggatgccc 161
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||| ||||||||||| Sbjct: 1210 atggagatgctgctggggatgccc 1187
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3198 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2966 tgctgttggggatgcccat 2948
>ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2775 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2764 tgctgttggggatgcccat 2746
>gb|AC123599.6| Mus musculus chromosome 5, clone RP23-231D13, complete sequence Length = 191607 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 cattcccattatacccacc 71 ||||||||||||||||||| Sbjct: 7126 cattcccattatacccacc 7144
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence Length = 182182 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 gcagctcaaatggagatgc 154 ||||||||||||||||||| Sbjct: 149164 gcagctcaaatggagatgc 149182
>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence Length = 184662 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 gcagctcaaatggagatgc 154 ||||||||||||||||||| Sbjct: 66627 gcagctcaaatggagatgc 66645
>gb|AC102688.10| Mus musculus chromosome 5, clone RP24-138J15, complete sequence Length = 166655 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 cattcccattatacccacc 71 ||||||||||||||||||| Sbjct: 110263 cattcccattatacccacc 110281
>ref|XM_843236.1| PREDICTED: Canis familiaris similar to testis-specific LRR protein (LOC606813), mRNA Length = 900 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgc 166 ||||||||||||||||||| Sbjct: 491 gagatgctgttggggatgc 473
>gb|AC160945.5| Mus musculus 10 BAC RP24-187J13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168109 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 149 agatgctgttggggatgcc 167 ||||||||||||||||||| Sbjct: 72023 agatgctgttggggatgcc 72005
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 25242564 tgctgttggggatgcccat 25242546 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 25209465 tgctgttggggatgcccat 25209483
>dbj|AB125883.1| Ipomoea batatas SRF4 mRNA for cellulose synthase-like protein, partial cds Length = 731 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 169 atctccatcaccattttct 187 ||||||||||||||||||| Sbjct: 560 atctccatcaccattttct 542
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 107687 tgctgttggggatgcccat 107669 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 74588 tgctgttggggatgcccat 74606
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 17749 tgctgttggggatgcccat 17731
>ref|XM_310233.2| Anopheles gambiae str. PEST ENSANGP00000024377 (ENSANGG00000020805), partial mRNA Length = 654 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 164 tgcccatctccatcaccat 182 ||||||||||||||||||| Sbjct: 307 tgcccatctccatcaccat 289
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full insert sequence Length = 3196 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2964 tgctgttggggatgcccat 2946
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 agatgctgttggggatgcc 167 ||||||||||||||||||| Sbjct: 5128 agatgctgttggggatgcc 5146
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds Length = 2232 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2041 tgctgttggggatgcccat 2023
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds Length = 2664 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2449 tgctgttggggatgcccat 2431
>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the complete sequence Length = 226075 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 gcagctcaaatggagatgc 154 ||||||||||||||||||| Sbjct: 75588 gcagctcaaatggagatgc 75606
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for lipoxygenase, complete cds Length = 3007 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 tgctgttggggatgcccat 170 ||||||||||||||||||| Sbjct: 2879 tgctgttggggatgcccat 2861
>emb|AL732547.8| Mouse DNA sequence from clone RP23-24E11 on chromosome 4, complete sequence Length = 206741 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 168 catctccatcaccattttc 186 ||||||||||||||||||| Sbjct: 109332 catctccatcaccattttc 109350 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,293,434 Number of Sequences: 3902068 Number of extensions: 1293434 Number of successful extensions: 95997 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95633 Number of HSP's gapped (non-prelim): 364 length of query: 190 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 168 effective length of database: 17,147,199,772 effective search space: 2880729561696 effective search space used: 2880729561696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)