ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDde... 50 2e-06
2PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDb... 39 0.003
3PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDb... 38 0.007
4PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLD... 37 0.009
5PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLD... 37 0.012
6PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLD... 35 0.034
7MMHB_AGKHA (Q9YI92) Mamushigin beta chain precursor 29 3.1
8YNA8_YEAST (P53983) Hypothetical 76.7 kDa protein in SPO1-SIS1 i... 29 3.1
9DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Digl... 28 4.1
10IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185) 28 4.1
11ZAN_MOUSE (O88799) Zonadhesin precursor 28 4.1
12TBX11_CAEEL (Q20257) Putative T-box protein 11 28 5.4
13LACY_STRTR (P23936) Lactose permease (Lactose-proton symporter) ... 28 7.0
14A2AP_BOVIN (P28800) Alpha-2-antiplasmin precursor (Alpha-2-plasm... 28 7.0
15APEB_PSEPK (Q88M44) Probable M18-family aminopeptidase 2 (EC 3.4... 28 7.0
16JAG1B_BRARE (Q90Y54) Jagged-1b precursor (Jagged1b) (Jagged3) 27 9.1
17CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with mul... 27 9.1

>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD|
           delta)
          Length = 868

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGAPT-SLPDSLT 281
           V+ DGK+ PLPD E FPDVGGKI GA + +LPD+LT
Sbjct: 832 VDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867



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>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta|
            1) (PLDbeta)
          Length = 967

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -1

Query: 385  VEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM 278
            V+  GK+ PLP  E FPDVGG I G   ++ ++LT+
Sbjct: 932  VDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967



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>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta|
           2) (PLDdelta1)
          Length = 915

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM 278
           V+  GK+ PLP  E FPDVGG + G+  ++ ++LT+
Sbjct: 880 VDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915



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>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD|
           gamma 2)
          Length = 824

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM 278
           V+  GK+  LP  E FPD+GGKI G+  +L ++LT+
Sbjct: 789 VDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 824



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>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD|
           gamma 1) (Choline phosphatase) (Lipophosphodiesterase
           II) (Lecithinase D)
          Length = 858

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM 278
           V+  GK+  LP  E FPD+GGKI G+  +L ++LT+
Sbjct: 823 VDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858



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>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD|
           gamma 3)
          Length = 866

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM 278
           V+  GK+  LP  E FPD+GGKI G+   + ++LT+
Sbjct: 831 VDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866



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>MMHB_AGKHA (Q9YI92) Mamushigin beta chain precursor|
          Length = 146

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
 Frame = -3

Query: 212 SECLVLPTDDDNLHRNLWIT--HCVAYRE------STGCSRCVVELCAF 90
           +EC+V  TD   L  N WIT   C+A +       S  CSR    +C F
Sbjct: 96  NECMVEWTDGTRLSHNAWITESECIAAKTTDNQWLSRPCSRTYNVVCKF 144



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>YNA8_YEAST (P53983) Hypothetical 76.7 kDa protein in SPO1-SIS1 intergenic|
           region
          Length = 669

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 6   CTVRSRNVKTIN*PCPVSCTDCRKKKSYKG 95
           C V  RN+ T    C   C DCR    YKG
Sbjct: 620 CKVNKRNIVTWPCRCLALCDDCRISLGYKG 649



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>DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase|
           1) (DGK 1) (DAG kinase 1)
          Length = 1020

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 67  TVEKKNLTKAHNSTTHREQPVLSLYATQCVIHRLRCRLSSSVGKT 201
           T+E  + T   N TT  +   +S + TQC+   LR  +SSS   T
Sbjct: 566 TMEFGSSTTTTNRTTTTKSISMSTFETQCLQQTLRTAMSSSSSNT 610



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>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)|
          Length = 1235

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 385 VEPDGKIVPLPDQECFPDVGGKICGA 308
           V+P+G ++  P   C PD+GG  C +
Sbjct: 653 VDPNGYMMMSPSGSCSPDIGGGSCSS 678



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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 261  TSLQSPSWLFCS---PVKPL*MSCL 196
            T+LQ P+W  CS   P+KP  + C+
Sbjct: 2272 TALQGPAWAHCSSRVPIKPFLLKCM 2296



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>TBX11_CAEEL (Q20257) Putative T-box protein 11|
          Length = 322

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 25  MSKLSIDPV-LSHVQTVEKKNLTKAHNSTTHREQPVLSLYATQCVIHRLRCRLSSSVGKT 201
           +  +S D + +++ ++ E  N +  H  T HR  PVL++Y    ++H  R   S  +  T
Sbjct: 103 LRNVSFDQIRITNRKSKEDGNASYVHLLTQHRYIPVLTIYEGDQLVHTARIPHSQFISVT 162

Query: 202 RH 207
            +
Sbjct: 163 AY 164



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>LACY_STRTR (P23936) Lactose permease (Lactose-proton symporter) (Lactose|
           transport protein) [Includes: Putative
           phosphotransferase enzyme IIA component (EC 2.7.1.-)
           (Putative PTS system EIIA component)]
          Length = 634

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 263 STVTSHRQRIRKRGRGAADLATDVGEAFLVGQRDDLT 373
           ST+T+H+Q I K G  A   AT +  AF+V ++  LT
Sbjct: 417 STITTHQQFIFKLGMFAFPAATMLIGAFIVARKITLT 453



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>A2AP_BOVIN (P28800) Alpha-2-antiplasmin precursor (Alpha-2-plasmin inhibitor)|
           (Alpha-2-PI) (Alpha-2-AP)
          Length = 492

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
 Frame = +2

Query: 74  KKKILQRRTTLQHTVNSPCFPYTPHNV*STDYGAGYHHPLARQDIQRGFT-----GEQNN 238
           + + LQR   + H  + PC P+    +   D G G     AR  +Q+GF       EQ+ 
Sbjct: 126 QNQTLQRLKEVLHADSGPCLPHLLSRL-CQDLGPGAFRLAARMYLQKGFPIKEDFLEQSE 184

Query: 239 QLGL*REVSTVTSHRQRIRKRGRGAADLATDVGEAFLVGQRDDLTIRL 382
           QL   + +S      + +    R   +      E FL    DD  + L
Sbjct: 185 QLFGAKPMSLTGMKGEDLANINRWVKEATEGKIEDFLSDLPDDTVLLL 232



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>APEB_PSEPK (Q88M44) Probable M18-family aminopeptidase 2 (EC 3.4.11.-)|
          Length = 429

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 262 DFSSESKLVILLSCKTSLNVLSCQRMMITCTVICGSH 152
           DF + ++L  LLSC   L  L       TC ++C  H
Sbjct: 228 DFIAGARLDNLLSCYAGLQALLAADSDETCVLVCNDH 264



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>JAG1B_BRARE (Q90Y54) Jagged-1b precursor (Jagged1b) (Jagged3)|
          Length = 1213

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 208 NVLSCQRMMITCTVICGSHIVWRIGKARAVHGVL*SCAPL 89
           N+  CQ   I CT++       RIGKAR       SC P+
Sbjct: 878 NICQCQNGRIHCTMMWCGPKSCRIGKARGGCPASQSCVPI 917



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>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3|
           domains) (Adapter protein CMS)
          Length = 639

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = +3

Query: 216 VLQESKITSLDSEEKSVP*RHIVSESGSEVGAPQI-----LPPTSGKHSWSGSGTILP 374
           +  E K  SL  EEK    +  + +  S+  APQ+      PPT   +    SGT+ P
Sbjct: 355 IAAEKKYFSLKPEEKDE--KSTLEQKPSKPAAPQVPPKKPTPPTKASNLLRSSGTVYP 410


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,738,128
Number of Sequences: 219361
Number of extensions: 1181991
Number of successful extensions: 3317
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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