Clone Name | rbastl11e02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_451611.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B01804g predicted mRNA Length = 9729 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 aaatgcgatgtgcctaaaggaaat 26 ||||||||| |||||||||||||| Sbjct: 1545 aaatgcgatttgcctaaaggaaat 1522
>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3' end of the AMD1 gene for S-adenosylmethionine decarboxylase 1, two novel genes, a glutathione S-transferase M2 (muscle) (GSTM2) pseudogene and three CpG islands, complete sequence Length = 190440 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 taaccaatcactccacattt 90 |||||||||||||||||||| Sbjct: 140419 taaccaatcactccacattt 140438
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 aaatgcgatgtgcctaaaggaaat 26 ||||||||| |||||||||||||| Sbjct: 145767 aaatgcgatttgcctaaaggaaat 145744
>gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160000 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 caatcactccacattttcc 93 ||||||||||||||||||| Sbjct: 38837 caatcactccacattttcc 38819
>ref|NM_142332.1| Drosophila melanogaster CG18213-RA (CG18213), mRNA Length = 3000 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 atgcgatgtgcctaaagga 23 ||||||||||||||||||| Sbjct: 837 atgcgatgtgcctaaagga 855
>gb|AC060788.11| Homo sapiens chromosome 8, clone CTD-2008O4, complete sequence Length = 177717 Score = 38.2 bits (19), Expect = 4.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 aatgcgatgtgcctaaaggaaat 26 |||||||||||| |||||||||| Sbjct: 66462 aatgcgatgtgcataaaggaaat 66440
>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR01E04, complete sequence Length = 172674 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 atgcgatgtgcctaaagga 23 ||||||||||||||||||| Sbjct: 24146 atgcgatgtgcctaaagga 24128
>gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR03M20, complete sequence Length = 175335 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 atgcgatgtgcctaaagga 23 ||||||||||||||||||| Sbjct: 143999 atgcgatgtgcctaaagga 143981
>gb|AF216527.1|AF216527 Dunaliella tertiolecta calcium-dependent protein kinase mRNA, complete cds Length = 2532 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaccaatcactccacattt 90 ||||||||||||||||||| Sbjct: 2040 aaccaatcactccacattt 2022
>gb|BT003585.1| Drosophila melanogaster LD11102 full insert cDNA Length = 3227 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 atgcgatgtgcctaaagga 23 ||||||||||||||||||| Sbjct: 920 atgcgatgtgcctaaagga 938
>gb|AE003716.5| Drosophila melanogaster chromosome 3R, section 54 of 118 of the complete sequence Length = 220035 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 atgcgatgtgcctaaagga 23 ||||||||||||||||||| Sbjct: 10721 atgcgatgtgcctaaagga 10703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 635,033 Number of Sequences: 3902068 Number of extensions: 635033 Number of successful extensions: 36883 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36864 Number of HSP's gapped (non-prelim): 19 length of query: 99 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 78 effective length of database: 17,151,101,840 effective search space: 1337785943520 effective search space used: 1337785943520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)