Clone Name | rbastl11d12 |
---|---|
Clone Library Name | barley_pub |
>THIO2_ANASP (P20857) Thioredoxin 2 (Trx-2)| Length = 110 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = -1 Query: 171 YSFFCQECQVM*QLCKLTRVTC--RRAVTRLTLQPLPTVLDSWSIHEPPALR 22 ++ +C CQ+M L L T R V +L + P PT + + + PALR Sbjct: 28 WASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALR 79
>SYH_LISMO (Q8Y708) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 425 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -1 Query: 201 RCKH-----ASFEQQYSFFCQECQVM*QLCKLTRVTCRRAVTRLTLQPLPTVLD 55 R KH A FE FC ECQV L + C++ +Q P++LD Sbjct: 173 RLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILD 226
>SYH_LISMF (Q71ZF0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 425 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -1 Query: 201 RCKH-----ASFEQQYSFFCQECQVM*QLCKLTRVTCRRAVTRLTLQPLPTVLD 55 R KH A FE FC ECQV L + C++ +Q P++LD Sbjct: 173 RLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILD 226
>SYH_LISIN (Q92BJ3) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 425 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -1 Query: 201 RCKH-----ASFEQQYSFFCQECQVM*QLCKLTRVTCRRAVTRLTLQPLPTVLD 55 R KH A FE FC ECQV L + C++ +Q P++LD Sbjct: 173 RLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILD 226
>ODP1_BUCAI (P57301) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)| Length = 887 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 144 LGTLDKRKNIAAQMKHVYTVGPIHVRKNYGVLVGKKE 254 +G + + KNIA Q+K + G IH+R + + V E Sbjct: 397 MGVIAEGKNIAHQIKKININGIIHIRDRFNIPVSNDE 433
>Y1411_SYNY3 (P72725) UPF0272 protein slr1411| Length = 422 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +3 Query: 120 LIYRAVTSLGTLDKRKNIAAQMKHVYTV----GPIHVRKNYGVLVGKK 251 L++R TSLG +++ A + TV GPI ++ YG GKK Sbjct: 330 LLFRETTSLGVRVRQQQRYALEREWQTVVIPHGPIRIKVAYGYQAGKK 377
>PDC2_CANAL (O60035) Protein PDC2| Length = 836 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 227 LRCVGWKKRTMHSISQVLLFSCW-QLNLYTLL 319 +R + W R+ HS+S +FS W + +L+ LL Sbjct: 428 IRAIEWITRSWHSVSSERIFSSWKKTHLFNLL 459
>PEL22_ARATH (Q93Z25) Probable pectate lyase 22 precursor (EC 4.2.2.2)| Length = 432 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 32 GGS--WIDQLSNTVGSGCSVNLVTALRHVTRVNLQSCYITWHS 154 GGS W+D S S C+ L+ A+R T + + + Y+T H+ Sbjct: 236 GGSHVWVDHCSL---SNCNDGLIDAIRGSTAITISNNYLTHHN 275
>HOXV_RALEU (P31914) Hydrogenase expression/formation protein hoxV| Length = 383 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/43 (25%), Positives = 21/43 (48%) Frame = +3 Query: 171 IAAQMKHVYTVGPIHVRKNYGVLVGKKEQCIPLARSFCSPVGN 299 +A + H+ VR++ G+LV + C+P F +G+ Sbjct: 337 VAHMLAHLAPFDAADVRRSIGILVAAYDPCVPYTVEFAESLGD 379
>SGCG_HUMAN (Q13326) Gamma-sarcoglycan (Gamma-SG) (35 kDa dystrophin-associated| glycoprotein) (35DAG) Length = 290 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 161 KKEYCCSNEA-CLHRGPNSCTEKLRCVGWKKRTMHSISQVLLFSCWQLNLYTLLYVL 328 +++Y + E C+ R N K+ GW+KR ++ + +LL +NL +++L Sbjct: 2 REQYTTATEGICIERPENQYVYKIGIYGWRKRCLY-LFVLLLLIILVVNLALTIWIL 57
>YKL6_CAEEL (P42173) Hypothetical protein C03C10.6| Length = 870 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -1 Query: 132 LCKLTRVTCRRAVTRLTLQPLPTVLDSWSIHEPPALRKMQH 10 LC+L V C RA T + ++D W+ P L+ + H Sbjct: 736 LCQLWTVYCERAATYSSTTAFAHLVDFWARVTPAILQLLSH 776 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,906,328 Number of Sequences: 219361 Number of extensions: 952541 Number of successful extensions: 2896 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2860 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2896 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)