ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TNI3K_MOUSE (Q5GIG6) Serine/threonine-protein kinase TNNI3K (EC ... 28 7.7

>TNI3K_MOUSE (Q5GIG6) Serine/threonine-protein kinase TNNI3K (EC 2.7.11.1)|
           (TNNI3-interacting kinase) (Cardiac ankyrin repeat
           kinase)
          Length = 833

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/25 (36%), Positives = 20/25 (80%)
 Frame = -2

Query: 304 YGGITS*SVSKNSGYPDSVQLLCKH 230
           YGG+T+  ++  +G+P++V++L +H
Sbjct: 131 YGGLTALHIAAIAGHPEAVEVLLQH 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,327,729
Number of Sequences: 219361
Number of extensions: 673517
Number of successful extensions: 1822
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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