ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NEU2_ONCKE (Q91167) Isoticin-neurophysin IT 2 precursor [Contain... 32 0.35
2NEUI_FUGRU (O42493) Isoticin-neurophysin IT 1 precursor [Contain... 30 1.7

>NEU2_ONCKE (Q91167) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
          (IT); Neurophysin IT 2]
          Length = 156

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 94 AATVCLLYNLCICSICYAHACDV 26
          A +VCLLY L +CS CY   C +
Sbjct: 5  AVSVCLLYALSVCSACYISNCPI 27



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>NEUI_FUGRU (O42493) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
          (IT); Neurophysin IT 1]
          Length = 155

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 94 AATVCLLYNLCICSICYAHACDV 26
          A +VCLL+ L +CS CY   C +
Sbjct: 5  AISVCLLFLLSVCSACYISNCPI 27


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,670,309
Number of Sequences: 219361
Number of extensions: 396606
Number of successful extensions: 779
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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