ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
2ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group... 86 1e-13
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
5dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
6dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
7gb|AY104160.1| Zea mays PCO080306 mRNA sequence 64 4e-07
8gb|BT018338.1| Zea mays clone EL01T0403A05.c mRNA sequence 48 0.023
9gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, comp... 44 0.36
10gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, com... 42 1.4
11emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 i... 42 1.4
12emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in ... 42 1.4
13dbj|AK053276.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 1.4
14gb|AC163714.3| Gallus gallus BAC clone TAM31-13E5 from chromosom... 42 1.4
15ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phos... 40 5.7
16ref|NM_020816.1| Homo sapiens kinesin family member 17 (KIF17), ... 40 5.7
17ref|XM_513170.1| PREDICTED: Pan troglodytes kinesin family membe... 40 5.7
18gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cance... 40 5.7
19gb|AC121317.7| Mus musculus chromosome 6, clone RP24-343J20, com... 40 5.7
20gb|U52964.2|TBU52964 Trypanosoma brucei brucei alternative oxida... 40 5.7
21gb|AY484427.1| Homo sapiens kinesin isoform KIF17B (KIF17B) mRNA... 40 5.7
22gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom... 40 5.7
23ref|XM_731938.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.7
24ref|XM_732666.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.7
25emb|AL663074.13| Human DNA sequence from clone RP5-930J4 on chro... 40 5.7
26gb|BC065927.1| Homo sapiens kinesin family member 17, mRNA (cDNA... 40 5.7
27emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 i... 40 5.7
28gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p... 40 5.7
29dbj|AB188573.1| Trypanosoma evansi aox mRNA for alternative oxid... 40 5.7
30dbj|AB211244.1| Trypanosoma brucei rhodesiense AOX mRNA for alte... 40 5.7
31gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complet... 40 5.7
32gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3... 40 5.7
33emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 40 5.7
34emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in... 40 5.7
35emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 i... 40 5.7
36gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complet... 40 5.7
37dbj|AB037826.2| Homo sapiens mRNA for KIAA1405 protein, partial cds 40 5.7
38emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chr... 40 5.7
39emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chr... 40 5.7
40emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chr... 40 5.7
41gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosom... 40 5.7
42dbj|AB070617.1| Trypanosoma brucei brucei AOX mRNA for alternati... 40 5.7
43dbj|AB070614.1| Trypanosoma brucei brucei AOX mRNA for alternati... 40 5.7 
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3121

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 312  tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
            |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 2770 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2716
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>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA
          Length = 3169

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 312  tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
            |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2723
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                      
Query: 312     tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
               |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 2570749 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2570695
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>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                    
Query: 312   tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
             |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 49532 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 49478
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>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full
            insert sequence
          Length = 3120

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 312  tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
            |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 2769 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2715
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>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full
            insert sequence
          Length = 3169

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 312  tccctcactcctcgtggtattccgggttcttcttcagaactacaaagccctccaa 366
            |||||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2723
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>gb|AY104160.1| Zea mays PCO080306 mRNA sequence
          Length = 1460

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 316  tcactcctcgtggtattccgggttcttcttcagaactacaaagccctc 363
            ||||||||||||||| || ||||||||||||||||  |||||||||||
Sbjct: 1044 tcactcctcgtggtactctgggttcttcttcagaatcacaaagccctc 997
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>gb|BT018338.1| Zea mays clone EL01T0403A05.c mRNA sequence
          Length = 1023

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 316 tcactcctcgtggtattccgggttcttcttcagaactacaaagccctc 363
           |||||| || ||||| |||||||||||||||| ||  |||||||||||
Sbjct: 595 tcactcttcatggtactccgggttcttcttcaaaatcacaaagccctc 548
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>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   aataaaaatgtttttggatgaa 188
             ||||||||||||||||||||||
Sbjct: 56757 aataaaaatgtttttggatgaa 56736
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>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence
          Length = 208850

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tacacacttgatacatataca 38
             |||||||||||||||||||||
Sbjct: 48749 tacacacttgatacatataca 48729
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>emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 in linkage group 24,
              complete sequence
          Length = 143425

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     cacacttgatacatatacaaa 40
              |||||||||||||||||||||
Sbjct: 114349 cacacttgatacatatacaaa 114369



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     cacacttgatacatatacaaa 40
              |||||||||||||||||||||
Sbjct: 104510 cacacttgatacatatacaaa 104530
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>emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in linkage group 7, complete
              sequence
          Length = 181415

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     cacacttgatacatatacaaa 40
              |||||||||||||||||||||
Sbjct: 154850 cacacttgatacatatacaaa 154830
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>dbj|AK053276.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130006D24 product:unclassifiable, full
            insert sequence
          Length = 3651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   tacacacttgatacatataca 38
            |||||||||||||||||||||
Sbjct: 2970 tacacacttgatacatataca 2990
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>gb|AC163714.3| Gallus gallus BAC clone TAM31-13E5 from chromosome w, complete sequence
          Length = 191678

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   ttcttcttcagaactacaaag 358
             |||||||||||||||||||||
Sbjct: 82162 ttcttcttcagaactacaaag 82182
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>ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase/ kinase
            AT1G66980 mRNA, complete cds
          Length = 3512

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  taaaaatgtttttggatgaa 188
            ||||||||||||||||||||
Sbjct: 3459 taaaaatgtttttggatgaa 3440
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>ref|NM_020816.1| Homo sapiens kinesin family member 17 (KIF17), mRNA
          Length = 3968

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  agccctccaacgtggaggtc 376
            ||||||||||||||||||||
Sbjct: 1983 agccctccaacgtggaggtc 2002
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>ref|XM_513170.1| PREDICTED: Pan troglodytes kinesin family member 17 (LOC456592),
           mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 agccctccaacgtggaggtc 376
           ||||||||||||||||||||
Sbjct: 560 agccctccaacgtggaggtc 579
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>gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205032

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     acacacttgatacatataca 38
              ||||||||||||||||||||
Sbjct: 184660 acacacttgatacatataca 184679
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>gb|AC121317.7| Mus musculus chromosome 6, clone RP24-343J20, complete sequence
          Length = 179807

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    acacacttgatacatataca 38
             ||||||||||||||||||||
Sbjct: 23843 acacacttgatacatataca 23862
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>gb|U52964.2|TBU52964 Trypanosoma brucei brucei alternative oxidase (AOX) mRNA, complete
           cds
          Length = 990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 tccgggttcttcttcagaac 351
           ||||||||||||||||||||
Sbjct: 896 tccgggttcttcttcagaac 877
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>gb|AY484427.1| Homo sapiens kinesin isoform KIF17B (KIF17B) mRNA, complete cds
          Length = 3968

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  agccctccaacgtggaggtc 376
            ||||||||||||||||||||
Sbjct: 1983 agccctccaacgtggaggtc 2002
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>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   taaaaatgtttttggatgaa 188
             ||||||||||||||||||||
Sbjct: 27065 taaaaatgtttttggatgaa 27084
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>ref|XM_731938.1| Plasmodium chabaudi chabaudi hypothetical protein (PC101680.00.0)
           partial mRNA
          Length = 287

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  acatatacaaataagcttaa 49
           ||||||||||||||||||||
Sbjct: 213 acatatacaaataagcttaa 232
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>ref|XM_732666.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105151.00.0)
           partial mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  cacttgatacatatacaaat 41
           ||||||||||||||||||||
Sbjct: 599 cacttgatacatatacaaat 618
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>emb|AL663074.13| Human DNA sequence from clone RP5-930J4 on chromosome 1 Contains the 5'
             end of the KIF17 gene for kinesin family member 17, three
             novel genes, the 3' end of gene HP1-BP74 and two CpG
             islands, complete sequence
          Length = 85781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   agccctccaacgtggaggtc 376
             ||||||||||||||||||||
Sbjct: 16384 agccctccaacgtggaggtc 16365
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>gb|BC065927.1| Homo sapiens kinesin family member 17, mRNA (cDNA clone MGC:70843
            IMAGE:6171598), complete cds
          Length = 3750

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  agccctccaacgtggaggtc 376
            ||||||||||||||||||||
Sbjct: 1747 agccctccaacgtggaggtc 1766
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>emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 in linkage group 1,
             complete sequence
          Length = 121187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   ctccaaaaacttgcatcaga 294
             ||||||||||||||||||||
Sbjct: 30564 ctccaaaaacttgcatcaga 30545
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>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence
          Length = 162949

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    atgccgaggtgtaagagcat 218
              ||||||||||||||||||||
Sbjct: 107859 atgccgaggtgtaagagcat 107878
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>dbj|AB188573.1| Trypanosoma evansi aox mRNA for alternative oxidase, complete cds,
            strain:IL3927
          Length = 1128

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tccgggttcttcttcagaac 351
            ||||||||||||||||||||
Sbjct: 1034 tccgggttcttcttcagaac 1015
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>dbj|AB211244.1| Trypanosoma brucei rhodesiense AOX mRNA for alternative oxidase,
           complete cds
          Length = 990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 tccgggttcttcttcagaac 351
           ||||||||||||||||||||
Sbjct: 896 tccgggttcttcttcagaac 877
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>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   tccctcactcctcgtggtat 331
             ||||||||||||||||||||
Sbjct: 66748 tccctcactcctcgtggtat 66729
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>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence
          Length = 184579

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   atgccgaggtgtaagagcat 218
             ||||||||||||||||||||
Sbjct: 65374 atgccgaggtgtaagagcat 65393
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>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    taaaaatgtttttggatgaa 188
              ||||||||||||||||||||
Sbjct: 161862 taaaaatgtttttggatgaa 161843
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>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1,
              complete sequence
          Length = 130339

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    ctccaaaaacttgcatcaga 294
              ||||||||||||||||||||
Sbjct: 100541 ctccaaaaacttgcatcaga 100560
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>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
             complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tacacacttgatacatatac 37
             ||||||||||||||||||||
Sbjct: 49955 tacacacttgatacatatac 49936
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>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence
          Length = 131867

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tttttggatgaaccaccagc 196
             ||||||||||||||||||||
Sbjct: 64488 tttttggatgaaccaccagc 64507
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>dbj|AB037826.2| Homo sapiens mRNA for KIAA1405 protein, partial cds
          Length = 3570

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  agccctccaacgtggaggtc 376
            ||||||||||||||||||||
Sbjct: 1585 agccctccaacgtggaggtc 1604
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>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete
             sequence
          Length = 151493

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aataaaaatgtttttggatg 186
             ||||||||||||||||||||
Sbjct: 61609 aataaaaatgtttttggatg 61590
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>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
             sequence
          Length = 221374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    acacacttgatacatataca 38
             ||||||||||||||||||||
Sbjct: 64556 acacacttgatacatataca 64575
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>emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chromosome 1, complete
             sequence
          Length = 150434

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   agccctccaacgtggaggtc 376
             ||||||||||||||||||||
Sbjct: 39457 agccctccaacgtggaggtc 39438
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>gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosome 12, complete sequence
          Length = 183684

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    cttcttcagaactacaaagc 359
              ||||||||||||||||||||
Sbjct: 141531 cttcttcagaactacaaagc 141550
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>dbj|AB070617.1| Trypanosoma brucei brucei AOX mRNA for alternative oxidase,
           complete cds, strain:TC221
          Length = 990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 tccgggttcttcttcagaac 351
           ||||||||||||||||||||
Sbjct: 896 tccgggttcttcttcagaac 877
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>dbj|AB070614.1| Trypanosoma brucei brucei AOX mRNA for alternative oxidase, complete
            cds, strain:ILTat1.4
          Length = 1147

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tccgggttcttcttcagaac 351
            ||||||||||||||||||||
Sbjct: 1053 tccgggttcttcttcagaac 1034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,861,265
Number of Sequences: 3902068
Number of extensions: 3861265
Number of successful extensions: 71217
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71110
Number of HSP's gapped (non-prelim): 107
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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