>Y757_STRCO (Q9RJD5) Hypothetical protein SCO0757|
          Length = 336

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
 Frame = -3

Query: 368 RHSVRQTKEPSVVAARVQWRQAITTLRLSRYYQGYEILVAILQRR-----K*QRFCLV*T 204
           RH +R        AAR++W    T +  SR +Q    L      R     + +  C    
Sbjct: 188 RHQLRDA------AARIRWEGPRTAVATSRTFQQLGRLCGAPPGRYGPFTERRMRC---- 237

Query: 203 KDLSRLVPVQILLSPADTCRCPGIFSPLFLHQLHGTIVG 87
            DL   V     LS A+  R PGI +P     L G +VG
Sbjct: 238 SDLGDAVGRLAALSAAERARLPGISAPRAAQSLAGAVVG 276

>VL1_HPV18 (P06794) Major capsid protein L1|
          Length = 568

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 110 DVEKEEKIFLDSDKYQQGRAKSAQGRVYSNP*FTPNKNVATFSSVGSPP 256
           +V+ +EK  LD D+Y  GR    Q  +   P   P K  A  ++  S P
Sbjct: 510 NVDLKEKFSLDLDQYPLGRKFLVQAGLRRKPTIGPRKRSAPSATTSSKP 558

>GSTP1_XENLA (Q8JFZ2) Glutathione S-transferase P 1 (EC 2.5.1.18) (XlGSTP1-1)|
           (GST class-pi)
          Length = 212

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 80  VQIPQWYHEADVEKEEKIFLDSDKYQQG 163
           VQIP W+   D  K+E +F    ++Q G
Sbjct: 34  VQIPDWFSGKDARKKEAVFGQLPQFQDG 61

>HXC6_XENLA (P02832) Homeobox protein Hox-C6 (XlHbox-1) (AC1) [Contains:|
           Homeobox protein Hox-C6 PRII; Homeobox protein Hox-C6
           PRI]
          Length = 234

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 167 AKSAQGRVYSNP*FTPNKNVATFSSVG 247
           A  AQ R+YS+P +TP  NV   SS G
Sbjct: 42  AAVAQNRIYSSPFYTPQDNVVFGSSRG 68

>PDC2_ORYSA (P51848) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC)|
          Length = 603

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +3

Query: 24  CLFNSIVWLFNKGNYFISMYKSHNGTMKLM*KKRRKYSWTATSISRGE 167
           C  NSI++L N G Y I + + H+G   ++  K   Y+    +I  GE
Sbjct: 496 CAQNSIIFLINNGGYTIEV-EIHDGPYNVI--KNWNYTGLVDAIHNGE 540

>HXC6_NOTVI (P14858) Homeobox protein Hox-C6 (NvHox-1) (FH-2)|
          Length = 234

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 176 AQGRVYSNP*FTPNKNVATFSSVGSPPKFHS 268
           AQ R+YS+P ++P  NV  FSS   P ++ S
Sbjct: 45  AQNRIYSSPFYSPQDNV-VFSSGRGPYEYGS 74

>HEMA_IADIR (P11132) Hemagglutinin precursor [Contains: Hemagglutinin HA1|
           chain; Hemagglutinin HA2 chain]
          Length = 566

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 30  FNSIVWLFNKGNYFISMYKSHNGTMK 107
           F ++VWL  K N + ++ +S+N T K
Sbjct: 160 FRNVVWLIKKDNAYPTIKRSYNNTNK 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,155,065
Number of Sequences: 219361
Number of extensions: 1049551
Number of successful extensions: 2470
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)