Clone Name | rbastl11c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YD49_SCHPO (Q10302) Hypothetical protein C22H10.09 in chromosome I | 27 | 9.8 |
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>YD49_SCHPO (Q10302) Hypothetical protein C22H10.09 in chromosome I| Length = 646 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 142 AKRPQKNSYPSCNPHLKK 195 + RPQK ++P C HLKK Sbjct: 629 SSRPQKATFPLCTVHLKK 646 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,125,754 Number of Sequences: 219361 Number of extensions: 913086 Number of successful extensions: 2349 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2349 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)