Clone Name | rbastl11c03 |
---|---|
Clone Library Name | barley_pub |
>GAC1_YEAST (P28006) Serine/threonine-protein phosphatase 1 regulatory subunit| GAC1 Length = 793 Score = 31.6 bits (70), Expect = 0.79 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 414 PHGNFRAAFLTYHSLGKLVPQICSPDFSGG 325 P+ F A L HSL L+P+I +P F GG Sbjct: 554 PNDTFTTANLFNHSLNSLMPEISTPSFFGG 583
>UL23_HCMVA (P16846) Hypothetical protein UL23| Length = 284 Score = 29.6 bits (65), Expect = 3.0 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%) Frame = +1 Query: 73 SRLGRPGQEKLIIW-----MVVRRR--LLRSPRNDSPCHRQCASLQCPQPL 204 SR +PGQ ++W +V+RRR L+R D+ R + L CP+PL Sbjct: 21 SRPWKPGQRVALVWPKDRCLVIRRRWRLVRDEGRDA--QRLASYLCCPEPL 69
>ISPE_RHORT (Q2RXS7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 304 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/31 (51%), Positives = 16/31 (51%) Frame = -2 Query: 381 YHSLGKLVPQICSPDFSGGQDTRIVCPAVGL 289 YH L LV FSG DT I CPA GL Sbjct: 33 YHDLDSLVV------FSGAHDTLIACPAEGL 57
>ZFPL1_HUMAN (O95159) Zinc finger protein-like 1 (Zinc-finger protein MCG4)| Length = 310 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/58 (34%), Positives = 25/58 (43%) Frame = +1 Query: 103 LIIWMVVRRRLLRSPRNDSPCHRQCASLQCPQPLLHNFSATGLRGISTSQLKPLLTLV 276 L W + R + PRN +P QC S C P+ F T L G S L+ L V Sbjct: 73 LFHWACLNERAAQLPRNTAPAGYQCPS--CNGPI---FPPTNLAGPVASALREKLATV 125
>DDFL1_HUMAN (Q8TDY4) Development and differentiation enhancing factor-like 1| (Protein up-regulated in liver cancer 1) Length = 903 Score = 28.5 bits (62), Expect = 6.7 Identities = 22/60 (36%), Positives = 25/60 (41%) Frame = +3 Query: 216 QRHWASRNLDISAQTTAHPCHCNSAGQQLGKLFGCPDHH*NLGSIFVEPIYPVNGMSRTL 395 Q HWAS LDIS +T +A Q G+ CP P PV SRTL Sbjct: 718 QAHWASGRLDISNKTYETVASLGAATPQ-GESEDCP------------PPLPVKNSSRTL 764
>YMN3_PODAN (P15563) Hypothetical 49.1 kDa protein in ND3 intron| Length = 433 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +1 Query: 211 NFSATGLRGISTSQLKPLLTLVIVTLQAN---SWANYSGVLTTTKIWGAYLWNQ 363 N++ + + S L L+I+++ W+NYSG++ + KI+ + + N+ Sbjct: 32 NWTGKSINWVKLSNSGKTLKLLILSINRKVNCGWSNYSGIVISQKIYESIIGNR 85
>ELTD1_RAT (Q9ESC1) EGF, latrophilin and seven transmembrane domain-containing| protein 1 precursor (EGF-TM7-latrophilin-related protein) (ETL protein) Length = 738 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -2 Query: 414 PHGNFRAAFLTYHSLGKLVPQICSPDFSGGQDTRIVCPAVGLQSYNDKGEQ 262 P+GN AFL Y S+G L+ S DF +G QS N KG++ Sbjct: 339 PNGNVIVAFLCYRSIGPLLSS--SDDF-----------LLGAQSDNSKGKE 376
>PRSS8_HUMAN (Q16651) Prostasin precursor (EC 3.4.21.-) [Contains: Prostasin| light chain; Prostasin heavy chain] Length = 343 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 341 GEHICGTNLPSEWYVKNAARKFP 409 G H+CG +L SE +V +AA FP Sbjct: 66 GVHVCGGSLVSEQWVLSAAHCFP 88
>HUT1_DEBHA (Q6BMV3) UDP-galactose transporter homolog 1| Length = 354 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/22 (45%), Positives = 18/22 (81%) Frame = +2 Query: 185 FSVLSLSSTTSAPLGFEESRHL 250 F ++SL+S+ S+PLG+E +H+ Sbjct: 99 FVIISLTSSLSSPLGYESLKHV 120
>ZFPL1_MOUSE (Q9DB43) Zinc finger protein-like 1| Length = 310 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = +1 Query: 103 LIIWMVVRRRLLRSPRNDSPCHRQCASLQCPQPLLHNFSATGLRGISTSQLKPLLTLV 276 L W + R + PRN +P QC S C P+ F L G S L+ L V Sbjct: 73 LFHWACINERAAQLPRNTAPAGYQCPS--CNGPI---FPPANLAGPVASALREKLATV 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,641,984 Number of Sequences: 219361 Number of extensions: 1363575 Number of successful extensions: 3658 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3588 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3657 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)