>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
             complete sequence
          Length = 28434780

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 335   aaatctggggagcatatttgtggaaccaatttacccagtgaatggtatgtcaagaacgct 394
             ||||||||||||| | | |||||||||| |||||||||||||||||| ||||| || |||
Sbjct: 45644 aaatctggggagcctttctgtggaaccagtttacccagtgaatggtaggtcaaaaatgct 45585

                                    
Query: 395   gcacggaagttcccatgaggtac 417
             ||||| || ||||||||||||||
Sbjct: 45584 gcacgcaatttcccatgaggtac 45562



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 179   cctcgcttcagtgtcctcagcctctcctccacaacttcagc 219
             ||||||| |||||||||||||||||| | || |||||||||
Sbjct: 46561 cctcgctgcagtgtcctcagcctctctttcagaacttcagc 46521

>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 335   aaatctggggagcatatttgtggaaccaatttacccagtgaatggtatgtcaagaacgct 394
             ||||||||||||| | | |||||||||| |||||||||||||||||| ||||| || |||
Sbjct: 45644 aaatctggggagcctttctgtggaaccagtttacccagtgaatggtaggtcaaaaatgct 45585

                                    
Query: 395   gcacggaagttcccatgaggtac 417
             ||||| || ||||||||||||||
Sbjct: 45584 gcacgcaatttcccatgaggtac 45562



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 179   cctcgcttcagtgtcctcagcctctcctccacaacttcagc 219
             ||||||| |||||||||||||||||| | || |||||||||
Sbjct: 46561 cctcgctgcagtgtcctcagcctctctttcagaacttcagc 46521

>dbj|AK102372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091L19, full
           insert sequence
          Length = 1033

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                       
Query: 335 aaatctggggagcatatttgtggaaccaatttacccagtgaatggtatgtcaagaacgct 394
           ||||||||||||| | | |||||||||| |||||||||||||||||| ||||| || |||
Sbjct: 195 aaatctggggagcctttctgtggaaccagtttacccagtgaatggtaggtcaaaaatgct 136

                                  
Query: 395 gcacggaagttcccatgaggtac 417
           ||||| || ||||||||||||||
Sbjct: 135 gcacgcaatttcccatgaggtac 113



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 248 ctcagctcaaaccactgctcacccttgtcattgtaactctgcaggccaa 296
           ||||||| |||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 279 ctcagctgaaaccactgctctcccttgtcactgtaactctgcagcccaa 231



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 179 cctcgcttcagtgtcctcagcctctcctccacaacttcagc 219
           ||||||| |||||||||||||||||| | || |||||||||
Sbjct: 375 cctcgctgcagtgtcctcagcctctctttcagaacttcagc 335

>gb|AY106734.1| Zea mays PCO080774 mRNA sequence
          Length = 713

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 245 catctcagctcaaaccactgctcacccttgtcattgtaact 285
           |||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 41  catctcagctgaaaccactgctctcccttgtcgttgtaact 1



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 92  gacaggaaaaactcataatctggatggtggttc 124
           |||||||| ||||| ||||| ||||||||||||
Sbjct: 216 gacaggaagaactcgtaatcaggatggtggttc 184

>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence
          Length = 131960

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 92     gacaggaaaaactcataatctggatg 117
              ||||||||||||||||||||||||||
Sbjct: 105424 gacaggaaaaactcataatctggatg 105449

>ref|XM_474330.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2877

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 247  tctcagctcaaaccactgctcacccttgtcattgtaactc 286
            |||||| | |||||| ||||| ||||||||||||||||||
Sbjct: 2685 tctcagttgaaaccattgctctcccttgtcattgtaactc 2646

>dbj|AK103357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126L11, full
            insert sequence
          Length = 3716

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 247  tctcagctcaaaccactgctcacccttgtcattgtaactc 286
            |||||| | |||||| ||||| ||||||||||||||||||
Sbjct: 3143 tctcagttgaaaccattgctctcccttgtcattgtaactc 3104

>emb|BX927285.6| Zebrafish DNA sequence from clone CH211-65M8, complete sequence
          Length = 188393

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    gcgttagcaggcaaaggaaca 49
             |||||||||||||||||||||
Sbjct: 86712 gcgttagcaggcaaaggaaca 86732

>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence
          Length = 189250

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 330    cactaaaatctggggagcatatttg 354
              |||| ||||||||||||||||||||
Sbjct: 184762 cacttaaatctggggagcatatttg 184786

>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence
          Length = 168383

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     gcgttagcaggcaaaggaaca 49
              |||||||||||||||||||||
Sbjct: 151073 gcgttagcaggcaaaggaaca 151093

>emb|AL450384.34| Human DNA sequence from clone RP11-383B4 on chromosome 10 Contains the 3'
              end of the CACNB2 gene for calcium channel
              voltage-dependent beta 2 subunit, the 5' end of a novel
              gene, a novel gene and the 3' end of a novel gene
              (LOC221078) (FLJ23743), complete sequence
          Length = 124571

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 237    aatctcgacatctcagctcaaacc 260
              ||||| ||||||||||||||||||
Sbjct: 101554 aatcttgacatctcagctcaaacc 101577

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     ccttgccatcgtcaatgcgc 179
               ||||||||||||||||||||
Sbjct: 1319025 ccttgccatcgtcaatgcgc 1319044

>gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete sequence
          Length = 159946

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tctccaggatgtagcatagc 75
            ||||||||||||||||||||
Sbjct: 8122 tctccaggatgtagcatagc 8103

>gb|AC068987.38| Homo sapiens 12 BAC RP11-923I11 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 75663

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 gggtgtcctgaccaccacta 334
           ||||||||||||||||||||
Sbjct: 310 gggtgtcctgaccaccacta 329

>gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 212622

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    gggtgtcctgaccaccacta 334
              ||||||||||||||||||||
Sbjct: 210150 gggtgtcctgaccaccacta 210169

>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence
          Length = 190156

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tcctcagcctctcctccaca 211
             ||||||||||||||||||||
Sbjct: 44702 tcctcagcctctcctccaca 44721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,429,222
Number of Sequences: 3902068
Number of extensions: 3429222
Number of successful extensions: 75906
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75850
Number of HSP's gapped (non-prelim): 56
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)