Clone Name | rbastl11b12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IAA9_ARATH (Q38827) Auxin-responsive protein IAA9 (Indoleacetic ... | 32 | 0.61 | 2 | PEL5_ARATH (Q9FXD8) Probable pectate lyase 5 precursor (EC 4.2.2.2) | 30 | 2.3 | 3 | ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Aggl... | 28 | 5.1 | 4 | GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48) | 28 | 8.8 |
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>IAA9_ARATH (Q38827) Auxin-responsive protein IAA9 (Indoleacetic acid-induced| protein 9) Length = 338 Score = 31.6 bits (70), Expect = 0.61 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +3 Query: 9 ENKASGFARSITDSRQINLELSSSRSTEKNWLIEETSVSK 128 +N ASG R +D+ E SS TEKNW+ E + ++ Sbjct: 113 KNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQ 152
>PEL5_ARATH (Q9FXD8) Probable pectate lyase 5 precursor (EC 4.2.2.2)| Length = 408 Score = 29.6 bits (65), Expect = 2.3 Identities = 10/22 (45%), Positives = 18/22 (81%) Frame = +2 Query: 59 QPRIVIQQINRKKLANRRNIGI 124 +P +V+Q++N K A+RRN+G+ Sbjct: 32 EPELVVQEVNEKINASRRNLGV 53
>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Agglutinin-like| adhesin) Length = 1419 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +3 Query: 3 TFENKASGFARSITDSRQINLELSSSRSTEKNWLIEETSVSKQERIFYNSDTS 161 + + ++S +S+++S + ELSSS S E + + VS +SDTS Sbjct: 764 SIDAQSSHLVQSVSNSISTSQELSSSSSEESSTFATDALVSSDASSILSSDTS 816
>GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)| Length = 454 Score = 27.7 bits (60), Expect = 8.8 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 Query: 57 INLELSSSRSTEKNWLIEETSVSKQERIFYNSDTS 161 ++ ++SS R TEK ++EE S Q R+ N DT+ Sbjct: 95 VDFDISSVRVTEKPSVLEEKSGVIQFRVVSNDDTA 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,612,568 Number of Sequences: 219361 Number of extensions: 356141 Number of successful extensions: 1063 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1058 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1063 length of database: 80,573,946 effective HSP length: 36 effective length of database: 72,676,950 effective search space used: 1744246800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)