Clone Name | rbastl11b12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, c... | 40 | 2.3 | 2 | emb|AL138830.20| Human DNA sequence from clone RP3-399L15 on chr... | 40 | 2.3 | 3 | emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in... | 40 | 2.3 | 4 | emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chr... | 38 | 9.0 |
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>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence Length = 248718 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcctagtgaccatttgttaa 178 |||||||||||||||||||| Sbjct: 131357 tcctagtgaccatttgttaa 131376
>emb|AL138830.20| Human DNA sequence from clone RP3-399L15 on chromosome 6q21-22.2 Contains 2 putative novel genes, complete sequence Length = 141924 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tctagacagatcaacctagaattg 71 |||||||||||||||||| ||||| Sbjct: 42851 tctagacagatcaacctacaattg 42874
>emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in linkage group 25, complete sequence Length = 199974 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ataactgattctagacagat 58 |||||||||||||||||||| Sbjct: 99326 ataactgattctagacagat 99345
>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete sequence Length = 192154 Score = 38.2 bits (19), Expect = 9.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ctggctaatagaagaaaca 116 ||||||||||||||||||| Sbjct: 155997 ctggctaatagaagaaaca 156015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,587,431 Number of Sequences: 3902068 Number of extensions: 1587431 Number of successful extensions: 120506 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120495 Number of HSP's gapped (non-prelim): 11 length of query: 183 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 161 effective length of database: 17,147,199,772 effective search space: 2760699163292 effective search space used: 2760699163292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)