ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN451_HUMAN (Q9Y4E5) Zinc finger protein 451 (Coactivator for st... 35 0.040
2NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysin... 31 0.99
3NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysin... 29 3.7

>ZN451_HUMAN (Q9Y4E5) Zinc finger protein 451 (Coactivator for steroid|
           receptors)
          Length = 1061

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 47  GSCRKTLLDSDGFTANYNHYHCTLMKPSENSRGWKRNNYYKRNAEAA 187
           G+C K   D +    +++  HC L KPS    G +++N YK  A A+
Sbjct: 792 GTCTKAFHDPESAQQHFHRKHCFLQKPSVAHFGSEKSNLYKFTASAS 838



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>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein) (Androgen r
          Length = 2696

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -2

Query: 194  TEMPPQHFSCNSCSFSIHGCFHLVSSVCSDS 102
            TEMP   F CN C   IH CF     VC  S
Sbjct: 1574 TEMPRGKFICNECRTGIHTCF-----VCKQS 1599



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>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein)
          Length = 2588

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = -2

Query: 191  EMPPQHFSCNSCSFSIHGCFHLVSSVCSDS 102
            EMP   F CN C   IH CF     VC  S
Sbjct: 1473 EMPRGKFICNECHTGIHTCF-----VCKQS 1497


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,005,227
Number of Sequences: 219361
Number of extensions: 414431
Number of successful extensions: 1123
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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