>LPSD_RHIME (Q9R9N0) Lipopolysaccharide core biosynthesis glycosyl transferase|
           lpsD (EC 2.-.-.-)
          Length = 343

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 181 ETGRALYEAVFQRLSLCRAL*GVRVWRVV-PFEP 83
           E G  +YE VF+R+SL R L   R+ RV+  FEP
Sbjct: 47  ENGATIYEGVFRRISLSRFLLKWRMNRVLREFEP 80

>Y355_BIFLO (Q8G7B5) UPF0286 protein BL0355|
          Length = 256

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 9/43 (20%)
 Frame = -1

Query: 201 SLAIFRE----KP----EEPCTRRSSNASA-SAEHSRECVCGG 100
           SL IF E    KP      PCT R  + +A SA+HSRE V GG
Sbjct: 34  SLLIFSELGSYKPLNWMTAPCTIREIDPAAKSAQHSRESVAGG 76

>E1BL_ADEM1 (P12536) E1B protein, large T-antigen (55 kDa protein)|
          Length = 433

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 135 SAEHSREC--VCGGLYLLSLCCVVHRTCT 55
           S EHSREC   CGG + L    VVH T T
Sbjct: 386 SREHSRECQCFCGGRHRLLFPSVVHITPT 414

>TXAC_DENPO (P25681) Acetylcholinesterase toxin C|
          Length = 61

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = -1

Query: 222 CLSSTP*SLAIFREKPEEPCTRRSSNASASAEHSRECVC--GGLYLLSLCCVVHRTC 58
           C S T  S AI ++  E  C R+S          R C C  G  YL   CC     C
Sbjct: 3   CYSHTTTSRAILKDCGENSCYRKSRRHPPKMVLGRGCGCPPGDDYLEVKCCTSPDKC 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,677,116
Number of Sequences: 219361
Number of extensions: 550247
Number of successful extensions: 1290
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)