>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion|
           defective protein 3)
          Length = 1409

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 169 VPIIPSFLPSPPQWRALLVDFFCGCPFLFVHH 74
           +P++P+++PS  Q       F  G P  F HH
Sbjct: 315 IPLLPAYMPSAEQLLLAPTPFLIGVPSSFFHH 346

>IWS1_EMENI (Q5BEG5) Transcription factor iws1|
          Length = 429

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
 Frame = +2

Query: 80  YKQERTTTEEINKQSSPLRRGR-------KEGRNDRNSRGRRCHCAEEELEEGDGILSMA 238
           +K++RT  E  +K+    RR +       +EG +DR + G+R    + ELEE +  L  A
Sbjct: 90  HKRKRTEEEGTSKRKKEGRRRKSRRYAEEEEGGSDREAGGKRRKSKKAELEEDEETLDPA 149

>LRRN5_HUMAN (O75325) Leucine-rich repeats neuronal protein 5 precursor (Glioma|
           amplified on chromosome 1 protein)
          Length = 713

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 205 LLLRAVTATTSTVPIIPSFLPSPPQ 131
           LLL  V   T+ VP++P  +P PPQ
Sbjct: 8   LLLAWVAGATAAVPVVPWHVPCPPQ 32

>TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 92  RTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEE 205
           R   EE N+Q   LRR R+E    R    +R    EEE
Sbjct: 74  RAAEEEYNRQQEELRRQRQEEERQRREEEQRRQQEEEE 111

>MSX1_CHICK (P28361) Homeobox protein MSX-1 (Msh homeobox 1-like protein)|
           (CHOX-7)
          Length = 249

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 36  APIPFRNWTGQKSWCTNKKGQPQKKSTSRA 125
           +P+PFR W G  SW T ++G+ ++    RA
Sbjct: 15  SPLPFRRWKG--SWPTAERGRQRRSRGFRA 42

>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 50  QKLDGTKIMVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEEL 208
           ++LD  ++++ K E    +E+ K  + L+  R+  R    +RG++     E+L
Sbjct: 21  ERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAEIEREQL 73

>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 50  QKLDGTKIMVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEEL 208
           ++LD  ++++ K E    +E+ K  + L+  R+  R    +RG++     E+L
Sbjct: 21  ERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAEIEREQL 73

>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 50  QKLDGTKIMVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEEL 208
           ++LD  ++++ K E    +E+ K  + L+  R+  R    +RG++     E+L
Sbjct: 21  ERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAEIEREQL 73

>IWS1_ASPFU (Q4WSM6) Transcription factor iws1|
          Length = 460

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 74  MVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEELEEGD 220
           ++ + +R  TEE  +Q    R GR+E +N R          EE L+EG+
Sbjct: 117 LIGRHKRKRTEEDGQQVKRKREGRREKKNRRRD-------MEEGLDEGE 158

>ISPDF_BARQU (Q6G164) IspD/ispF bifunctional enzyme [Includes:|
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT);
           2-C-methyl-D-erythritol 2,4-cyclod
          Length = 391

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 238 GHRQDPVSFLQLLLRAVTATTSTVPIIPSFLPSPPQWR 125
           GH    V+F   L  A+ AT     I   FLPS PQW+
Sbjct: 262 GHSDADVAF-HALTDALLATQGAGDIGTHFLPSDPQWK 298

>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase xnp-1) (X-linked nuclear protein
           1)
          Length = 1359

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +2

Query: 11  STHPDARARTNSFQKLDGTKIMVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCH 190
           S   + R ++ S +K+D  K    K++RTT+   ++ S   R  + + ++ +  +     
Sbjct: 95  SDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSE 154

Query: 191 CAEEELEE 214
            +EE  EE
Sbjct: 155 SSEESEEE 162

>SYFB_DECAR (Q47CM9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 794

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -1

Query: 235 HRQDPVSFLQLL--LRAVTATTSTVPIIPSFLPSPPQWRALLVDFFCGCPFLFVHHDFCP 62
           +R D +S L +   + A+T   +++P++P  + S    RA+++D    CP       +C 
Sbjct: 165 NRADCLSLLGIAREVGAITGAATSLPVVPEVVASIADSRAVVLDAPEACPL------YCG 218

Query: 61  VQFLKGIGA 35
            + LKG+ A
Sbjct: 219 -RVLKGVNA 226

>ZIP1_YEAST (P31111) Synaptonemal complex protein ZIP1|
          Length = 875

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +2

Query: 92  RTTTEEINKQSSPLRRGRKEGRNDRNSRGRRCHCAEEELEEGDGILS 232
           +T+ E +NK  + L + +KE   +   +G+     + EL++  G LS
Sbjct: 272 KTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELDDCSGQLS 318

>IE68_EHV1K (P68337) Immediate-early protein IE68 (In vitro host-range factor)|
           (IR4 protein) (ORF S1-2)
          Length = 293

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 193 AVTATTSTVPIIPSFLPSPP 134
           A   T ST P+IPS  PSPP
Sbjct: 17  AQRGTPSTSPLIPSLTPSPP 36

>IE68_EHV1B (Q6S6W5) Immediate-early protein IE68 (In vitro host-range factor)|
           (IR4 protein) (ORF S1-2)
          Length = 293

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 193 AVTATTSTVPIIPSFLPSPP 134
           A   T ST P+IPS  PSPP
Sbjct: 17  AQRGTPSTSPLIPSLTPSPP 36

>MINK1_MOUSE (Q9JM52) Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated|
           protein kinase kinase kinase kinase 6) (MAPK/ERK kinase
           kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6)
           (Misshapen/NIK-related kinase) (GCK family kinase MiNK)
          Length = 1308

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = +2

Query: 5   KPSTHPDARARTNSFQKLDGTKIMVYKQERTTTEEINKQSSPLRRGRKEGRNDRNSRGRR 184
           KP  H     R  S+++  G   ++ K ERT  E        +         D +S    
Sbjct: 756 KPEDHRSRPGRPASYKRAIGEDFVLLK-ERTLDEAPKPPKKAM---------DYSSSSEE 805

Query: 185 CHCAEEELEEGDG 223
              +EEE EEGDG
Sbjct: 806 VESSEEEEEEGDG 818


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.128    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,530,466
Number of Sequences: 219361
Number of extensions: 562192
Number of successful extensions: 1650
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)