ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2)... 29 2.5
2HEPH_MOUSE (Q9Z0Z4) Hephaestin precursor (EC 1.-.-.-) 28 7.4
3OR4D2_HUMAN (P58180) Olfactory receptor 4D2 (Olfactory receptor ... 27 9.7

>BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C)|
          Length = 786

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 225 VLEMPKN*QSEVHDISCLPWQYCPSHQPKIR 317
           +LE PK+   E++D+  L W + P  +P  R
Sbjct: 741 ILEKPKSCAKEIYDVMKLCWSHGPEERPAFR 771



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>HEPH_MOUSE (Q9Z0Z4) Hephaestin precursor (EC 1.-.-.-)|
          Length = 1157

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 276 LPWQYCPSHQPKIRWHNRTK 335
           + W YCP    ++ WHN ++
Sbjct: 741 IEWDYCPDRSWELEWHNTSE 760



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>OR4D2_HUMAN (P58180) Olfactory receptor 4D2 (Olfactory receptor OR17-24)|
           (B-lymphocyte membrane protein BC2009)
          Length = 307

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 268 MSWTSDC*FLGISNTRSLSR 209
           ++W SD  FLG+S TR L R
Sbjct: 6   LTWVSDFVFLGLSQTRELQR 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,557,851
Number of Sequences: 219361
Number of extensions: 918442
Number of successful extensions: 1992
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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