Clone Name | rbastl11a06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.19 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gaaggggaaagcaaatacaaaaggg 58 ||||| ||||||||||||||||||| Sbjct: 2192856 gaaggcgaaagcaaatacaaaaggg 2192880
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.19 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gaaggggaaagcaaatacaaaaggg 58 ||||| ||||||||||||||||||| Sbjct: 2192800 gaaggcgaaagcaaatacaaaaggg 2192824
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 42.1 bits (21), Expect = 0.19 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gaaggggaaagcaaatacaaaaggg 58 ||||| ||||||||||||||||||| Sbjct: 75080 gaaggcgaaagcaaatacaaaaggg 75104
>gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosome 1, complete sequence Length = 163182 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 attaaaatatgaaggggaa 42 ||||||||||||||||||| Sbjct: 88489 attaaaatatgaaggggaa 88507
>emb|Z35637.1|CEC03C10 Caenorhabditis elegans Cosmid C03C10, complete sequence Length = 31418 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 attaaaatatgaaggggaa 42 ||||||||||||||||||| Sbjct: 6762 attaaaatatgaaggggaa 6744
>emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on chromosome 10 Contains part of the CACNB2 gene for calcium channel voltage-dependent beta 2 subunit and a novel gene, complete sequence Length = 177656 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 aggggaaagcaaatacaaa 54 ||||||||||||||||||| Sbjct: 161970 aggggaaagcaaatacaaa 161988
>gb|AC011356.6| Homo sapiens chromosome 5 clone CTC-359M8, complete sequence Length = 62242 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 aggggaaagcaaatacaaa 54 ||||||||||||||||||| Sbjct: 31947 aggggaaagcaaatacaaa 31929
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 35 aaggggaaagcaaatacaa 53 ||||||||||||||||||| Sbjct: 1864772 aaggggaaagcaaatacaa 1864754 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 684,172 Number of Sequences: 3902068 Number of extensions: 684172 Number of successful extensions: 46137 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46100 Number of HSP's gapped (non-prelim): 37 length of query: 73 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 52 effective length of database: 17,151,101,840 effective search space: 891857295680 effective search space used: 891857295680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)