>gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome 10, complete sequence
          Length = 231532

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     cttaaataagttttagcaat 117
              ||||||||||||||||||||
Sbjct: 123830 cttaaataagttttagcaat 123849

>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence
          Length = 212579

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aaaaacacacatttccaatc 75
              ||||||||||||||||||||
Sbjct: 122155 aaaaacacacatttccaatc 122174

>gb|AC009895.4|ATAC009895 Arabidopsis thaliana chromosome III BAC T21P5 genomic sequence,
             complete sequence
          Length = 82289

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    cagaacaaattcgaaaaaca 62
             ||||||||||||||||||||
Sbjct: 43948 cagaacaaattcgaaaaaca 43967

>gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 44    agaacaaattcgaaaaacacacatttcc 71
             |||||||| |||||| ||||||||||||
Sbjct: 37802 agaacaaagtcgaaagacacacatttcc 37829

>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence
          Length = 93375

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    aaacacacatttccaatcac 77
             ||||||||||||||||||||
Sbjct: 63348 aaacacacatttccaatcac 63329

>gb|AY080643.1| Arabidopsis thaliana At3g03440 mRNA sequence
          Length = 3221

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  cagaacaaattcgaaaaaca 62
           ||||||||||||||||||||
Sbjct: 534 cagaacaaattcgaaaaaca 515

>gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complete sequence
          Length = 246976

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aaaaacacacatttccaatc 75
              ||||||||||||||||||||
Sbjct: 245394 aaaaacacacatttccaatc 245375

>gb|AF099915.1| Caenorhabditis elegans cosmid E02H9, complete sequence
          Length = 38174

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    ttaaataagttttagcaat 117
             |||||||||||||||||||
Sbjct: 26005 ttaaataagttttagcaat 25987

>gb|AC147666.4| Pan troglodytes BAC clone CH251-196O7 from Y, complete sequence
          Length = 189158

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      tatcaccaagagatgatgg 23
              |||||||||||||||||||
Sbjct: 170167 tatcaccaagagatgatgg 170185

>gb|AC184157.2| Pan troglodytes BAC clone CH251-31B9 from chromosome 15, complete
              sequence
          Length = 167965

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     ttaaataagttttagcaat 117
              |||||||||||||||||||
Sbjct: 111885 ttaaataagttttagcaat 111867

>gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromosome 15, complete
             sequence
          Length = 177821

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    ttaaataagttttagcaat 117
             |||||||||||||||||||
Sbjct: 39595 ttaaataagttttagcaat 39613

>gb|AC142350.1| Pan troglodytes BAC clone RP43-12B4 from Y, complete sequence
          Length = 168803

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     tatcaccaagagatgatgg 23
             |||||||||||||||||||
Sbjct: 99072 tatcaccaagagatgatgg 99090

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 5       tatcaccaagagatgatgg 23
               |||||||||||||||||||
Sbjct: 7705880 tatcaccaagagatgatgg 7705862

>gb|U20861.1| Caenorhabditis elegans cosmid C28H8, complete sequence
          Length = 46255

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aaaacacacatttccaatc 75
            |||||||||||||||||||
Sbjct: 9779 aaaacacacatttccaatc 9761

>gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, complete sequence
          Length = 128182

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    aaaaacacacatttccaat 74
             |||||||||||||||||||
Sbjct: 56327 aaaaacacacatttccaat 56345

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     aataagttttagcaatcca 120
               |||||||||||||||||||
Sbjct: 4055097 aataagttttagcaatcca 4055115

>emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 in linkage group 11,
              complete sequence
          Length = 190179

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     caaattcgaaaaacacaca 66
              |||||||||||||||||||
Sbjct: 177331 caaattcgaaaaacacaca 177349

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 55      gaaaaacacacatttccaa 73
               |||||||||||||||||||
Sbjct: 3531006 gaaaaacacacatttccaa 3531024

>gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F15, complete sequence
          Length = 109314

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    aaaaacacacatttccaat 74
             |||||||||||||||||||
Sbjct: 58083 aaaaacacacatttccaat 58101

>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map 15q21.1,
              complete sequence
          Length = 185145

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     ttaaataagttttagcaat 117
              |||||||||||||||||||
Sbjct: 140305 ttaaataagttttagcaat 140323

>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence
          Length = 156789

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aagagatgatggaccaaat 30
              |||||||||||||||||||
Sbjct: 121679 aagagatgatggaccaaat 121697

>gb|AC006158.6|AC006158 Homo sapiens BAC clone RP11-441G8 from Y, complete sequence
          Length = 110359

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     tatcaccaagagatgatgg 23
             |||||||||||||||||||
Sbjct: 21458 tatcaccaagagatgatgg 21440

>gb|DQ020487.1| Sus scrofa clone BAC KNP_375G9, complete sequence
          Length = 142071

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     aaaaacacacatttccaat 74
              |||||||||||||||||||
Sbjct: 121032 aaaaacacacatttccaat 121014

>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OJ1641_C04
          Length = 134367

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 55  gaaaaacacacatttccaa 73
           |||||||||||||||||||
Sbjct: 323 gaaaaacacacatttccaa 341

>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    gaaaaacacacatttccaa 73
             |||||||||||||||||||
Sbjct: 68956 gaaaaacacacatttccaa 68974

>emb|BX284669.12| Zebrafish DNA sequence from clone CH211-280E18 in linkage group 20,
             complete sequence
          Length = 153189

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    caaattttgcagtaatgca 44
             |||||||||||||||||||
Sbjct: 45329 caaattttgcagtaatgca 45311



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    caaattttgcagtaatgca 44
             |||||||||||||||||||
Sbjct: 44576 caaattttgcagtaatgca 44558



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    caaattttgcagtaatgca 44
             |||||||||||||||||||
Sbjct: 35480 caaattttgcagtaatgca 35462

>gb|AC159013.2| Gallus gallus BAC clone CH261-33A3 from chromosome unknown, complete
            sequence
          Length = 166005

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 31   tttgcagtaatgcagaaca 49
            |||||||||||||||||||
Sbjct: 6709 tttgcagtaatgcagaaca 6727

>gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromosome unknown,
           complete sequence
          Length = 267345

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 31  tttgcagtaatgcagaaca 49
           |||||||||||||||||||
Sbjct: 583 tttgcagtaatgcagaaca 601

>gb|AC160640.2| Gallus gallus BAC clone CH261-166L21 from chromosome unknown,
            complete sequence
          Length = 233376

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 31   tttgcagtaatgcagaaca 49
            |||||||||||||||||||
Sbjct: 2468 tttgcagtaatgcagaaca 2450

>gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, complete sequence
          Length = 212430

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     atacttaaataagttttag 113
              |||||||||||||||||||
Sbjct: 103518 atacttaaataagttttag 103500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,381,602
Number of Sequences: 3902068
Number of extensions: 1381602
Number of successful extensions: 94494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94317
Number of HSP's gapped (non-prelim): 177
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)