Clone Name | rbastl10f09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems Human BAC library) complete sequence Length = 190482 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aaaacagcaagtgccaagttt 59 ||||||||||||||||||||| Sbjct: 23881 aaaacagcaagtgccaagttt 23901
>emb|CR391919.5| Zebrafish DNA sequence from clone DKEY-174K18 in linkage group 1, complete sequence Length = 179764 Score = 42.1 bits (21), Expect = 0.77 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 aaataatatggcaaaataaaaatca 154 |||||||||||||||| |||||||| Sbjct: 162368 aaataatatggcaaaaaaaaaatca 162344
>emb|CR848522.2| Xenopus tropicalis finished cDNA, clone TEgg030d13 Length = 2810 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 agcaagtgccaagtttttcac 64 ||||||||||||||||||||| Sbjct: 2345 agcaagtgccaagtttttcac 2325
>gb|AC147025.2| Pan troglodytes BAC clone RP43-92C7 from 7, complete sequence Length = 142948 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 actaaataatatggcaaaat 146 |||||||||||||||||||| Sbjct: 43800 actaaataatatggcaaaat 43819
>gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, complete sequence Length = 181387 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 agtctaagggcctatcaagg 225 |||||||||||||||||||| Sbjct: 64710 agtctaagggcctatcaagg 64691
>gb|AC004885.2| Homo sapiens PAC clone RP4-781A18 from 7, complete sequence Length = 190842 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 actaaataatatggcaaaat 146 |||||||||||||||||||| Sbjct: 59234 actaaataatatggcaaaat 59253
>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence Length = 35348 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agactaaataatatggcaaaataa 148 |||||||||||||||| ||||||| Sbjct: 16664 agactaaataatatggtaaaataa 16641
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aaaataaaaatcagataggt 161 |||||||||||||||||||| Sbjct: 172503 aaaataaaaatcagataggt 172522
>gb|AC114294.2| Homo sapiens chromosome 5 clone RP11-114J22, complete sequence Length = 69490 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ataatatggcaaaataaaaa 151 |||||||||||||||||||| Sbjct: 45541 ataatatggcaaaataaaaa 45560
>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence Length = 163772 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cctatcaaggacaaacagct 235 |||||||||||||||||||| Sbjct: 36898 cctatcaaggacaaacagct 36917
>emb|CT030256.13| Mouse DNA sequence from clone RP23-346K5 on chromosome 13, complete sequence Length = 197972 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tggaactaggaatcaaaaga 112 |||||||||||||||||||| Sbjct: 77570 tggaactaggaatcaaaaga 77589
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ataatatggcaaaataaaaatcag 155 ||||||| |||||||||||||||| Sbjct: 4385352 ataatattgcaaaataaaaatcag 4385329
>emb|BX465849.10| Zebrafish DNA sequence from clone DKEY-263L8 in linkage group 1, complete sequence Length = 136195 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aaataatatggcaaaataaa 149 |||||||||||||||||||| Sbjct: 14302 aaataatatggcaaaataaa 14321
>emb|AL163171.4|CNS01RIF Human chromosome 14 DNA sequence BAC R-406A9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 148578 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcaaaataaaaatcagatag 159 |||||||||||||||||||| Sbjct: 92450 gcaaaataaaaatcagatag 92469
>emb|AL355095.4|CNS05TCE Human chromosome 14 DNA sequence BAC R-11K13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 153099 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcaaaataaaaatcagatag 159 |||||||||||||||||||| Sbjct: 9959 gcaaaataaaaatcagatag 9978
>gb|AC164877.2| Mus musculus BAC clone RP24-340N21 from chromosome 13, complete sequence Length = 179184 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tggaactaggaatcaaaaga 112 |||||||||||||||||||| Sbjct: 77447 tggaactaggaatcaaaaga 77466
>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163784 Score = 40.1 bits (20), Expect = 3.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 agactaaataatatggcaaaataaaaat 152 |||||||||||||| |||||||||||| Sbjct: 110159 agactaaataatatcacaaaataaaaat 110186 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,822,418 Number of Sequences: 3902068 Number of extensions: 2822418 Number of successful extensions: 49681 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49627 Number of HSP's gapped (non-prelim): 54 length of query: 236 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 214 effective length of database: 17,147,199,772 effective search space: 3669500751208 effective search space used: 3669500751208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)