>DRC1A_CHICK (Q5ZM13) Down-regulated by CTNNB1 protein A|
          Length = 515

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
 Frame = +1

Query: 4   TNTYFIYSYK-VANITVLNNMPEKSGT---------CQEKTTIKGCSRQALVCASRRPDP 153
           T T F  S++ V+ +TV NN    SGT          QE+  I G  R  L   S++P+ 
Sbjct: 443 TTTVFSKSFEQVSGVTVANNRGGVSGTEANRFSACSLQEEKLIYGTERTDLPVLSKQPNQ 502

Query: 154 QRP 162
           QRP
Sbjct: 503 QRP 505

>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +1

Query: 70   KSGTCQEKTTIKGCSRQALVCASRRPDPQRPDIPKRNRKKKSNPXXXXXXXRENNTQDLN 249
            +S T ++K  + G +R   V +  R  P  PD P R  +K++ P        + N+Q  N
Sbjct: 2328 ESSTKRKKGQVPGPARSESVGSFGRA-PSAPDKPPRTPRKQATPSRVLPTKPKPNSQ--N 2384

Query: 250  ILTDPNSITISISTRHANRRSRISK--PGDQPMELAP 354
                P S        H  R+ R+ K  P  +P+   P
Sbjct: 2385 KPRPPPSEQRKAEPGHTQRKDRLGKAFPQGRPLLRPP 2421

>XRN1_HUMAN (Q8IZH2) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Strand-exchange|
            protein 1 homolog)
          Length = 1706

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = +1

Query: 73   SGTCQEKTTIKGCSRQALVCASRRPDPQRPDIPKRNRKKKSNPXXXXXXXRENNTQDLNI 252
            S T   K  IK  + +  V ++RR +   P  PK+N+K  S           +N Q ++ 
Sbjct: 1368 SNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDN 1427

Query: 253  LTDPNSITISISTRHANRRSRI 318
            +  P    I   +      SRI
Sbjct: 1428 MCWPAPSQIPPVSTPVTELSRI 1449

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 114  PPGSSMRLATARSPKTRH--S*EEPQEKKQPYMTPHTH*REQHTGPQHTDRPK 266
            PPG S  L  A  P+  +  +   PQE+  PY+    H  E      H+  PK
Sbjct: 2180 PPGPSFLLPLAPGPQLLNPGTPVSPQERPPPYLAVPGHGEEYPVAGAHSSPPK 2232

>YO83_CAEEL (P34619) Hypothetical protein ZK1236.3|
          Length = 1000

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 67  EKSGTCQEKTTIKGCSRQALVCASRRPDP 153
           EKSG      TIK  +   L+C SR+ DP
Sbjct: 805 EKSGRLNVSNTIKAINEYRLLCNSRQADP 833

>NINJ1_HUMAN (Q92982) Ninjurin-1 (Nerve injury-induced protein 1)|
          Length = 152

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 296 MPTGVPGSANLETSRWSWR 352
           +P G PGS +   +RW WR
Sbjct: 14  LPPGTPGSPDASPARWGWR 32

>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6|
          Length = 880

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 114 PPGSSMRLATARSPKTRHS*EEPQEKKQPYMTPHTH*REQHTGPQHTDRPKL 269
           P GS    + + S    ++    Q+K +   +PH   ++QH    HT+ P+L
Sbjct: 445 PGGSGGTPSNSSSNNNNNNSNNQQQKVEQQSSPHQLLQQQHHSTPHTNSPQL 496

>VCLC_PEA (P13918) Vicilin precursor|
          Length = 459

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 100 IKGCSRQALVCASRRPDPQRPDIPKRNR 183
           + G S  A VC S R DPQ P I K N+
Sbjct: 15  LMGISFLASVCVSSRSDPQNPFIFKSNK 42

>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 51  PQQHAGKIRDLSRKNNHKRL*PPGSSMRLATARSPKTRHS*EEPQEKKQPYMTP 212
           PQQH   + + + + +H RL  PG S +    +     H   + Q+++QP   P
Sbjct: 352 PQQHF--LPNQAHQGDHYRLSQPGLSQQQQQQQQQHHHHHHHQQQQQQQPQQQP 403

>CNTN2_MOUSE (Q61330) Contactin-2 precursor (Axonin-1) (Axonal glycoprotein|
           TAG-1) (Transient axonal glycoprotein 1) (TAX-1)
          Length = 1040

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 34  VANITVLNNMPEKSGT--CQEKTTIKGCSRQALVCASRRPDP 153
           + ++T+LN      GT  C  +T + G S++A V     P P
Sbjct: 571 IGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGP 612

>RHP41_SCHPO (Q10445) DNA repair protein rhp41|
          Length = 638

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +1

Query: 172 KRNRKKKSNPXXXXXXXRENNTQDLNILTDPNSITISISTRHANRRSRISKPGDQPME 345
           +R+ KK           R N    + ++     ++   S  H  R+ RI KPG QP++
Sbjct: 436 ERHLKKNQAIKTGKSCGRINTKNGVELVYPRKYVSNGFSAEHWYRKGRIIKPGAQPLK 493

>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 150 SPKTRHS*EEPQEKKQPYMTPHTH*REQHTGPQHTDRPKL 269
           S  T HS + P+ +     T HTH +E+ T  +HT +  L
Sbjct: 626 SSTTSHSCQSPEGRYSALKTKHTH-KERGTDSEHTHKAHL 664

>US12_HCMVA (P09721) Hypothetical protein HVLF6|
          Length = 281

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 329 PGLLILERLLACLVDIDIV---IEFGSVSMLRSCVLFSLVCVWC 207
           PG L+L  +   L  I +    + F    ++++ VL S++CVWC
Sbjct: 113 PGTLMLVMVYTTLTTISVSTIGLCFDRTVVIQAYVLSSMLCVWC 156

>RFBP_SALTY (P26406) Undecaprenyl-phosphate galactose phosphotransferase (EC|
           2.7.8.6) (Galactosyl-P-P-undecaprenol synthetase)
          Length = 476

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +1

Query: 4   TNTYFIYSYKVANITVLNNMPEKSGTCQEKTTIKGCSRQALVCAS 138
           T+  FI+S++V  + + NN+ ++S    ++T    CS   L+ AS
Sbjct: 252 TDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIAS 296

>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)|
          Length = 907

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
 Frame = +1

Query: 184 KKKSNPXXXXXXXRENNTQDLNILTDPN-----SIT----ISISTRHANRRSRISKPGDQ 336
           +  SNP        +N+T  + +LT  +     +IT     SIST H +  S   +PG  
Sbjct: 668 RPSSNPETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASISTHHVSTSSPAPRPGTT 727

Query: 337 PMELAPATS 363
                P  S
Sbjct: 728 SQASGPGNS 736


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,209,941
Number of Sequences: 219361
Number of extensions: 869611
Number of successful extensions: 1612
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)