ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl10d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_015657.3| Homo sapiens ATP-binding cassette, sub-family A... 44 0.086
2ref|NM_173076.2| Homo sapiens ATP-binding cassette, sub-family A... 44 0.086
3dbj|AK123578.1| Homo sapiens cDNA FLJ41584 fis, clone CTONG20204... 44 0.086
4dbj|AK096597.1| Homo sapiens cDNA FLJ39278 fis, clone OCBBF20108... 44 0.086
5gb|AY219711.1| Homo sapiens ABCA12 transporter subfamily A mRNA,... 44 0.086
6gb|AC114780.5| Homo sapiens BAC clone RP11-565M13 from 2, comple... 44 0.086
7gb|AC130673.10| Mus musculus chromosome 15, clone RP24-97F15, co... 42 0.34
8emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in... 42 0.34
9emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 i... 42 0.34
10gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, com... 42 0.34
11ref|XM_684985.1| PREDICTED: Danio rerio similar to Adipophilin (... 42 0.34
12emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in... 40 1.3
13emb|AL357498.16| Human DNA sequence from clone RP11-342H9 on chr... 40 1.3
14emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chr... 40 1.3
15gb|AC110772.3| Homo sapiens BAC clone RP11-217E13 from 4, comple... 40 1.3
16gb|M26506.1|YSCL10F Saccharomyces cerevisiae L10e protein gene, ... 40 1.3
17gb|AC108865.3| Homo sapiens BAC clone RP11-11N5 from 4, complete... 40 1.3
18gb|AC116967.2| Dictyostelium discoideum chromosome 2 map 5481549... 40 1.3
19emb|AL845369.7| Zebrafish DNA sequence from clone CH211-12E13 in... 40 1.3
20gb|M37326.1|YSCL10E S.cerevisiae ribosomal protein L10e gene, co... 40 1.3
21gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Can... 38 5.3
22gb|AC158641.12| Mus musculus 10 BAC RP23-461E22 (Roswell Park Ca... 38 5.3
23gb|AC122239.4| Mus musculus BAC clone RP23-143K14 from chromosom... 38 5.3
24emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in l... 38 5.3
25gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome ... 38 5.3
26emb|CR589874.12| Zebrafish DNA sequence from clone DKEY-259N11 i... 38 5.3
27emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in ... 38 5.3
28emb|BX663506.11| Zebrafish DNA sequence from clone CH211-162E15 ... 38 5.3
29gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 38 5.3
30emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 i... 38 5.3
31emb|CR381644.8| Zebrafish DNA sequence from clone CH211-80A15 in... 38 5.3
32emb|BX664749.12| Zebrafish DNA sequence from clone DKEY-53M7 in ... 38 5.3
33gb|AC011411.4| Homo sapiens chromosome 5 clone CTB-78O21, comple... 38 5.3
34gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, compl... 38 5.3
35emb|BX511080.4| Zebrafish DNA sequence from clone DKEY-237N7 in ... 38 5.3
36gb|DP000032.1| Felis catus target 116 genomic scaffold 38 5.3
37emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in... 38 5.3
38gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Canc... 38 5.3
39gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, com... 38 5.3
40gb|AC009432.7|AC009432 Homo sapiens chromosome 15, clone RP11-57... 38 5.3
41gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chrom... 38 5.3
42gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22... 38 5.3
43gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thali... 38 5.3
44emb|BX470181.7| Zebrafish DNA sequence from clone CH211-91P22 in... 38 5.3
45gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 38 5.3
46emb|CR931759.10| Zebrafish DNA sequence from clone DKEYP-39E9 in... 38 5.3
47emb|BX784025.12| Zebrafish DNA sequence from clone DKEY-72L14 in... 38 5.3
48emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 i... 38 5.3
49gb|AC172193.2| Mus musculus chromosome 7, clone RP24-224F23, com... 38 5.3
50emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-8... 38 5.3
51emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2... 38 5.3
52emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chro... 38 5.3 
>ref|NM_015657.3| Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 12
            (ABCA12), transcript variant 2, mRNA
          Length = 8097

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gattcatttattcatgatgatgttca 50
            ||||||| ||||||||||||||||||
Sbjct: 7457 gattcatgtattcatgatgatgttca 7432
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>ref|NM_173076.2| Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 12
            (ABCA12), transcript variant 1, mRNA
          Length = 9112

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gattcatttattcatgatgatgttca 50
            ||||||| ||||||||||||||||||
Sbjct: 8472 gattcatgtattcatgatgatgttca 8447
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>dbj|AK123578.1| Homo sapiens cDNA FLJ41584 fis, clone CTONG2020445, highly  similar
            to Homo sapiens ATP-binding cassette transporter family A
            member 12 (ABCA12) mRNA
          Length = 3639

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gattcatttattcatgatgatgttca 50
            ||||||| ||||||||||||||||||
Sbjct: 3012 gattcatgtattcatgatgatgttca 2987
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>dbj|AK096597.1| Homo sapiens cDNA FLJ39278 fis, clone OCBBF2010863, weakly similar to
            ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 1
          Length = 2216

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gattcatttattcatgatgatgttca 50
            ||||||| ||||||||||||||||||
Sbjct: 1597 gattcatgtattcatgatgatgttca 1572
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>gb|AY219711.1| Homo sapiens ABCA12 transporter subfamily A mRNA, complete cds
          Length = 9112

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gattcatttattcatgatgatgttca 50
            ||||||| ||||||||||||||||||
Sbjct: 8472 gattcatgtattcatgatgatgttca 8447
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>gb|AC114780.5| Homo sapiens BAC clone RP11-565M13 from 2, complete sequence
          Length = 63039

 Score = 44.1 bits (22), Expect = 0.086
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 25    gattcatttattcatgatgatgttca 50
             ||||||| ||||||||||||||||||
Sbjct: 46714 gattcatgtattcatgatgatgttca 46739
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>gb|AC130673.10| Mus musculus chromosome 15, clone RP24-97F15, complete sequence
          Length = 136395

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    tgttcacaggtagcttactaa 65
             |||||||||||||||||||||
Sbjct: 72735 tgttcacaggtagcttactaa 72755
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>emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in linkage group 15,
             complete sequence
          Length = 157412

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 15    gttgaaacctgattcatttattcat 39
             |||||||||||||||| ||||||||
Sbjct: 45936 gttgaaacctgattcacttattcat 45960
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>emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 in linkage group 15,
             complete sequence
          Length = 174316

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 15    gttgaaacctgattcatttattcat 39
             |||||||||||||||| ||||||||
Sbjct: 15179 gttgaaacctgattcacttattcat 15155
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>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence
          Length = 190455

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   tgttcacaggtagcttactaa 65
            |||||||||||||||||||||
Sbjct: 2458 tgttcacaggtagcttactaa 2478
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>ref|XM_684985.1| PREDICTED: Danio rerio similar to Adipophilin (Adipose
            differentiation-related protein) (ADRP) (LOC561572), mRNA
          Length = 1157

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 15   gttgaaacctgattcatttattcat 39
            |||||||||||||||| ||||||||
Sbjct: 1085 gttgaaacctgattcacttattcat 1061
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>emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in linkage group 14,
              complete sequence
          Length = 260668

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     atgttgaaacctgattcatt 32
              ||||||||||||||||||||
Sbjct: 249503 atgttgaaacctgattcatt 249522
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>emb|AL357498.16| Human DNA sequence from clone RP11-342H9 on chromosome 6, complete
             sequence
          Length = 101064

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ggaacaggcatgttgaaacc 23
             ||||||||||||||||||||
Sbjct: 54743 ggaacaggcatgttgaaacc 54724
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>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D, complete sequence
          Length = 186256

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tgaatgcaccaaaattattt 103
             ||||||||||||||||||||
Sbjct: 84417 tgaatgcaccaaaattattt 84436
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>gb|AC110772.3| Homo sapiens BAC clone RP11-217E13 from 4, complete sequence
          Length = 192046

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ctgattcatttattcatgat 42
             ||||||||||||||||||||
Sbjct: 17499 ctgattcatttattcatgat 17518
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>gb|M26506.1|YSCL10F Saccharomyces cerevisiae L10e protein gene, complete cds
          Length = 1720

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   tgattcatttattcatgatgatgt 47
            ||||||||||||||||||| ||||
Sbjct: 1653 tgattcatttattcatgataatgt 1676
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>gb|AC108865.3| Homo sapiens BAC clone RP11-11N5 from 4, complete sequence
          Length = 102733

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ctgattcatttattcatgat 42
             ||||||||||||||||||||
Sbjct: 57867 ctgattcatttattcatgat 57886
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>gb|AC116967.2| Dictyostelium discoideum chromosome 2 map 5481549-5500786 strain AX4,
            complete sequence
          Length = 19237

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   gaatgcaccaaaattatttt 104
            ||||||||||||||||||||
Sbjct: 7952 gaatgcaccaaaattatttt 7971
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>emb|AL845369.7| Zebrafish DNA sequence from clone CH211-12E13 in linkage group 5,
              complete sequence
          Length = 190981

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tgattcatttattcatgatg 43
              ||||||||||||||||||||
Sbjct: 154208 tgattcatttattcatgatg 154189
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>gb|M37326.1|YSCL10E S.cerevisiae ribosomal protein L10e gene, complete cds
          Length = 1720

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   tgattcatttattcatgatgatgt 47
            ||||||||||||||||||| ||||
Sbjct: 1653 tgattcatttattcatgataatgt 1676
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>gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 158496

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 88   tgcaccaaaattattttgacaacaagc 114
            ||||||||||| |||||||| ||||||
Sbjct: 2899 tgcaccaaaataattttgactacaagc 2925
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>gb|AC158641.12| Mus musculus 10 BAC RP23-461E22 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 186390

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 88    tgcaccaaaattattttgacaacaagc 114
             ||||||||||| |||||||| ||||||
Sbjct: 67821 tgcaccaaaataattttgactacaagc 67795
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>gb|AC122239.4| Mus musculus BAC clone RP23-143K14 from chromosome 8, complete sequence
          Length = 197109

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 31    tttattcatgatgatgttcacag 53
             ||||||||||||||| |||||||
Sbjct: 28666 tttattcatgatgattttcacag 28688
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>emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in linkage group 6, complete
             sequence
          Length = 168549

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    tgttgaaacctgattcatttatt 36
             ||||||||||||||||| |||||
Sbjct: 34613 tgttgaaacctgattcacttatt 34635
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>gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome 7, complete sequence
          Length = 265770

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 36     tcatgatgatgttcacaggtagc 58
              ||||| |||||||||||||||||
Sbjct: 155885 tcatgctgatgttcacaggtagc 155907
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>emb|CR589874.12| Zebrafish DNA sequence from clone DKEY-259N11 in linkage group 13,
              complete sequence
          Length = 145629

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     aatgcaccaaaattatttt 104
              |||||||||||||||||||
Sbjct: 141666 aatgcaccaaaattatttt 141684
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>emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in linkage group 18,
             complete sequence
          Length = 104077

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 77    tctgttctgaatgcaccaa 95
             |||||||||||||||||||
Sbjct: 35028 tctgttctgaatgcaccaa 35010
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>emb|BX663506.11| Zebrafish DNA sequence from clone CH211-162E15 in linkage group 2,
             complete sequence
          Length = 47461

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    gaaacctgattcatttatt 36
             |||||||||||||||||||
Sbjct: 26901 gaaacctgattcatttatt 26919
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>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    caccaaaattattttgaca 108
             |||||||||||||||||||
Sbjct: 19324 caccaaaattattttgaca 19306
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>emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 in linkage group 7
             Contains a putative novel gene, a novel retrotransposon
             and eight CpG islands, complete sequence
          Length = 146786

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aacctgattcatttattca 38
             |||||||||||||||||||
Sbjct: 79835 aacctgattcatttattca 79853
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>emb|CR381644.8| Zebrafish DNA sequence from clone CH211-80A15 in linkage group 8,
             complete sequence
          Length = 171750

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    tgttgaaacctgattcatttatt 36
             ||||||||||||||| |||||||
Sbjct: 32204 tgttgaaacctgattaatttatt 32226
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>emb|BX664749.12| Zebrafish DNA sequence from clone DKEY-53M7 in linkage group 5,
             complete sequence
          Length = 181789

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    attcatttattcatgatga 44
             |||||||||||||||||||
Sbjct: 22065 attcatttattcatgatga 22047
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>gb|AC011411.4| Homo sapiens chromosome 5 clone CTB-78O21, complete sequence
          Length = 163864

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 31    tttattcatgatgatgttcacag 53
             ||||||||||||||||| |||||
Sbjct: 59878 tttattcatgatgatgtgcacag 59856
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>gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, complete sequence
          Length = 188571

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     caggcatgttgaaacctga 26
             |||||||||||||||||||
Sbjct: 28008 caggcatgttgaaacctga 28026
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>emb|BX511080.4| Zebrafish DNA sequence from clone DKEY-237N7 in linkage group 3,
             complete sequence
          Length = 115272

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    atttattcatgatgatgtt 48
             |||||||||||||||||||
Sbjct: 19751 atttattcatgatgatgtt 19769
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>gb|DP000032.1| Felis catus target 116 genomic scaffold
          Length = 376810

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     ttcatttattcatgatgat 45
              |||||||||||||||||||
Sbjct: 107399 ttcatttattcatgatgat 107381
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>emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in linkage group 5,
             complete sequence
          Length = 195181

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    attcatttattcatgatga 44
             |||||||||||||||||||
Sbjct: 93217 attcatttattcatgatga 93235
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>gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 249420

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 88     tgcaccaaaattattttgacaacaagc 114
              ||||||||||| |||||||| ||||||
Sbjct: 248739 tgcaccaaaataattttgactacaagc 248765
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>gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, complete sequence
          Length = 171462

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    caccaaaattattttgaca 108
             |||||||||||||||||||
Sbjct: 94668 caccaaaattattttgaca 94686
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>gb|AC009432.7|AC009432 Homo sapiens chromosome 15, clone RP11-57P19, complete sequence
          Length = 199609

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    caccaaaattattttgaca 108
             |||||||||||||||||||
Sbjct: 31257 caccaaaattattttgaca 31275
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>gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chromosome unknown, complete
              sequence
          Length = 172466

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     gttgaaacctgattcattt 33
              |||||||||||||||||||
Sbjct: 161912 gttgaaacctgattcattt 161930
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>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete
             sequence
          Length = 111936

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    aatgcaccaaaattatttt 104
             |||||||||||||||||||
Sbjct: 67949 aatgcaccaaaattatttt 67931
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>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 99960

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    aatgcaccaaaattatttt 104
             |||||||||||||||||||
Sbjct: 26855 aatgcaccaaaattatttt 26837
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>emb|BX470181.7| Zebrafish DNA sequence from clone CH211-91P22 in linkage group 18,
             complete sequence
          Length = 186084

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    tctgttctgaatgcaccaa 95
             |||||||||||||||||||
Sbjct: 44181 tctgttctgaatgcaccaa 44199
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     gttctgaatgcaccaaaat 98
              |||||||||||||||||||
Sbjct: 920732 gttctgaatgcaccaaaat 920714
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>emb|CR931759.10| Zebrafish DNA sequence from clone DKEYP-39E9 in linkage group 19,
             complete sequence
          Length = 110315

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    tgttgaaacctgattcatttatt 36
             ||||||||||||||| |||||||
Sbjct: 34295 tgttgaaacctgattaatttatt 34317
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>emb|BX784025.12| Zebrafish DNA sequence from clone DKEY-72L14 in linkage group 8, complete
              sequence
          Length = 257681

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     accaaaattattttgacaa 109
              |||||||||||||||||||
Sbjct: 111052 accaaaattattttgacaa 111034
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>emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 in linkage group 18,
             complete sequence
          Length = 106095

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 77    tctgttctgaatgcaccaa 95
             |||||||||||||||||||
Sbjct: 37044 tctgttctgaatgcaccaa 37026
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>gb|AC172193.2| Mus musculus chromosome 7, clone RP24-224F23, complete sequence
          Length = 205619

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 36    tcatgatgatgttcacaggtagc 58
             ||||| |||||||||||||||||
Sbjct: 28347 tcatgctgatgttcacaggtagc 28369
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>emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-889B13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184039

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     gttgaaacctgattcattt 33
              |||||||||||||||||||
Sbjct: 101704 gttgaaacctgattcattt 101686
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>emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2200A16 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 140073

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     gttgaaacctgattcattt 33
              |||||||||||||||||||
Sbjct: 126633 gttgaaacctgattcattt 126615
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>emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chromosome X, complete
             sequence
          Length = 227581

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aacaggcatgttgaaacct 24
             |||||||||||||||||||
Sbjct: 40399 aacaggcatgttgaaacct 40417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,440,249
Number of Sequences: 3902068
Number of extensions: 1440249
Number of successful extensions: 120412
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120258
Number of HSP's gapped (non-prelim): 154
length of query: 116
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 95
effective length of database: 17,151,101,840
effective search space: 1629354674800
effective search space used: 1629354674800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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