ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl10c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085... 42 0.62
2gb|AY013285.1| Meloidogyne artiellia chitin synthase gene, compl... 42 0.62
3gb|AY873792.1| Popillia japonica iridescent virus ribonucleoside... 42 0.62
4gb|AY873791.1| Iridovirus IV31 ribonucleoside-diphosphate reduct... 42 0.62
5emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chro... 40 2.4
6gb|AC007493.7| Homo sapiens chromosome 16 clone RP11-21B23, comp... 40 2.4
7gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, com... 40 2.4
8gb|AC084702.4| Homo sapiens chromosome 18, clone RP11-1133K3, co... 40 2.4
9gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B1... 40 2.4
10gb|AC135075.5| Homo sapiens chromosome 8, clone RP11-557G24, com... 40 2.4
11emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chr... 40 2.4
12gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome... 38 9.7
13gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosom... 38 9.7
14gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, c... 38 9.7
15ref|XM_422075.1| PREDICTED: Gallus gallus similar to protein kin... 38 9.7
16gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, co... 38 9.7
17emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chro... 38 9.7
18gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome... 38 9.7
19gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosom... 38 9.7
20gb|AC122902.4| Mus musculus BAC clone RP23-40O6 from chromosome ... 38 9.7
21gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosom... 38 9.7
22gb|AY438979.1| Homo sapiens transforming growth factor, beta 2 (... 38 9.7
23gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, com... 38 9.7
24emb|AL138789.12| Human DNA sequence from clone RP4-694A7 on chro... 38 9.7
25gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 ma... 38 9.7
26gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosom... 38 9.7
27gb|AC007780.10| Homo sapiens chromosome 17, clone CTD-2004N4, co... 38 9.7
28gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-3... 38 9.7
29gb|AC103784.2| Homo sapiens chromosome 8, clone RP11-715C17, com... 38 9.7
30gb|AC158674.10| Mus musculus 6 BAC RP23-54E12 (Roswell Park Canc... 38 9.7
31dbj|AK134305.1| Mus musculus 13 days embryo male testis cDNA, RI... 38 9.7
32gb|AC183495.1| Brassica oleracea Contig A, complete sequence 38 9.7
33gb|AC096638.2| Homo sapiens chromosome 1 clone RP11-224O19, comp... 38 9.7
34gb|AC023405.6| Homo sapiens chromosome 8, clone RP11-199K17, com... 38 9.7
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
37gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complet... 38 9.7
38gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complet... 38 9.7
39ref|XM_220636.3| PREDICTED: Rattus norvegicus similar to CG14967... 38 9.7
40gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, comp... 38 9.7
41dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome ... 38 9.7
42dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
43dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
44dbj|AK069694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.7
45gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, comple... 38 9.7
46gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, com... 38 9.7
47gb|AC007792.1|AC007792 Homo sapiens chromosome 19, cosmid R29694... 38 9.7
48emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-8... 38 9.7
49emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-7... 38 9.7
50emb|BX005373.14| Zebrafish DNA sequence from clone DKEY-221M4 in... 38 9.7
51emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 i... 38 9.7
52emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in ... 38 9.7
53emb|AL954861.11| Zebrafish DNA sequence from clone CH211-8I17, c... 38 9.7
54gb|M87843.1|HUMTGFBET2 Human transforming growth factor beta-2 g... 38 9.7
55emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chr... 38 9.7
56emb|AJ007302.1|SSC7302 Sus scrofa triadin gene 38 9.7 
>emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085F17 on chromosome 20q11.1-11.23
             Contains the DNMT3B gene encoding DNA Cytosine-5
             Methyltransferase 3 beta, the MAPRE1 gene encoding a
             microtubule-associated protein, RP/EB family, member 1,
             part of a novel gene, ESTs, STSs, GSSs, and three CpG
             islands, complete sequence
          Length = 118899

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   caacacactgatgggctgaca 144
             |||||||||||||||||||||
Sbjct: 17611 caacacactgatgggctgaca 17591
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>gb|AY013285.1| Meloidogyne artiellia chitin synthase gene, complete cds
          Length = 11155

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   gcagaggaagggaacaagaaa 184
             |||||||||||||||||||||
Sbjct: 10531 gcagaggaagggaacaagaaa 10551
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>gb|AY873792.1| Popillia japonica iridescent virus ribonucleoside-diphosphate
           reductase large chain gene, partial cds
          Length = 677

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 37  tgaaagatgcaccaaagaaaa 57
           |||||||||||||||||||||
Sbjct: 225 tgaaagatgcaccaaagaaaa 245
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>gb|AY873791.1| Iridovirus IV31 ribonucleoside-diphosphate reductase large chain
           gene, partial cds
          Length = 595

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 37  tgaaagatgcaccaaagaaaa 57
           |||||||||||||||||||||
Sbjct: 156 tgaaagatgcaccaaagaaaa 176
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>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33
             Contains the 3' ends of genes FLJ34719 and KIAA0191,
             complete sequence
          Length = 127006

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    caaagaaaataacagcaaca 68
             ||||||||||||||||||||
Sbjct: 23605 caaagaaaataacagcaaca 23624
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>gb|AC007493.7| Homo sapiens chromosome 16 clone RP11-21B23, complete sequence
          Length = 155461

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     aaagaaaataacagcaacatcttg 73
              |||||||| |||||||||||||||
Sbjct: 123532 aaagaaaaaaacagcaacatcttg 123509
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>gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, complete sequence
          Length = 135609

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    accaaagaaaataacagcaa 66
             ||||||||||||||||||||
Sbjct: 30224 accaaagaaaataacagcaa 30205
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>gb|AC084702.4| Homo sapiens chromosome 18, clone RP11-1133K3, complete sequence
          Length = 141820

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    agaaaataacagcaacatct 71
             ||||||||||||||||||||
Sbjct: 84404 agaaaataacagcaacatct 84423
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>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence
          Length = 162607

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    accaaagaaaataacagcaa 66
             ||||||||||||||||||||
Sbjct: 10133 accaaagaaaataacagcaa 10114
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>gb|AC135075.5| Homo sapiens chromosome 8, clone RP11-557G24, complete sequence
          Length = 72016

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    accaaagaaaataacagcaa 66
             ||||||||||||||||||||
Sbjct: 42631 accaaagaaaataacagcaa 42612
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>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete
              sequence
          Length = 207922

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     caaagaaaataacagcaaca 68
              ||||||||||||||||||||
Sbjct: 114258 caaagaaaataacagcaaca 114277
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>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete
            sequence
          Length = 198672

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   aaagaaaataacagcaaca 68
            |||||||||||||||||||
Sbjct: 6719 aaagaaaataacagcaaca 6701
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>gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosome 3, complete sequence
          Length = 194271

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     tacagtgaaagatgcacca 50
              |||||||||||||||||||
Sbjct: 114341 tacagtgaaagatgcacca 114359
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>gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, complete sequence
          Length = 170090

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   aaagaaaataacagcaaca 68
            |||||||||||||||||||
Sbjct: 6039 aaagaaaataacagcaaca 6021
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>ref|XM_422075.1| PREDICTED: Gallus gallus similar to protein kinase MEKK2b
            (LOC424225), mRNA
          Length = 3225

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   aaagaaaataacagcaaca 68
            |||||||||||||||||||
Sbjct: 3028 aaagaaaataacagcaaca 3046
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>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence
          Length = 203120

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aaagaaaataacagcaaca 68
              |||||||||||||||||||
Sbjct: 151252 aaagaaaataacagcaaca 151234
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>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete
            sequence
          Length = 202398

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 39   aaagatgcaccaaagaaaa 57
            |||||||||||||||||||
Sbjct: 3225 aaagatgcaccaaagaaaa 3207
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>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence
          Length = 184292

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 164    gcagaggaagggaacaaga 182
              |||||||||||||||||||
Sbjct: 177926 gcagaggaagggaacaaga 177944
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>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence
          Length = 152908

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 166    agaggaagggaacaagaaa 184
              |||||||||||||||||||
Sbjct: 126681 agaggaagggaacaagaaa 126699
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>gb|AC122902.4| Mus musculus BAC clone RP23-40O6 from chromosome 3, complete sequence
          Length = 186144

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 163   tgcagaggaagggaacaag 181
             |||||||||||||||||||
Sbjct: 89554 tgcagaggaagggaacaag 89536
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>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence
          Length = 188616

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 164   gcagaggaagggaacaaga 182
             |||||||||||||||||||
Sbjct: 47253 gcagaggaagggaacaaga 47271
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>gb|AY438979.1| Homo sapiens transforming growth factor, beta 2 (TGFB2) gene,
            complete cds
          Length = 98039

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 161  attgcagaggaagggaaca 179
            |||||||||||||||||||
Sbjct: 3424 attgcagaggaagggaaca 3442
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>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence
          Length = 196300

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    agagctgtttgggttttct 113
             |||||||||||||||||||
Sbjct: 80761 agagctgtttgggttttct 80779
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>emb|AL138789.12| Human DNA sequence from clone RP4-694A7 on chromosome 1p31.2-32.1
             Contains the 3' end of the gene for cell cycle control
             protein SDP35 (SDP35), two novel genes and a thioredoxin
             (TXN) pseudogene, complete sequence
          Length = 96157

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    aagaaaataacagcaacat 69
             |||||||||||||||||||
Sbjct: 59965 aagaaaataacagcaacat 59983
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>gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 map 15, complete sequence
          Length = 224086

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aaagaaaataacagcaaca 68
              |||||||||||||||||||
Sbjct: 159405 aaagaaaataacagcaaca 159387
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>gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosome 14, complete
             sequence
          Length = 202193

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    aaagatgcaccaaagaaaa 57
             |||||||||||||||||||
Sbjct: 10377 aaagatgcaccaaagaaaa 10395
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>gb|AC007780.10| Homo sapiens chromosome 17, clone CTD-2004N4, complete sequence
          Length = 161492

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 172  agggaacaagaaaagggcc 190
            |||||||||||||||||||
Sbjct: 5074 agggaacaagaaaagggcc 5092
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>gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-324C9, complete
             sequence
          Length = 227949

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 120   ttaccaacacactgatggg 138
             |||||||||||||||||||
Sbjct: 46261 ttaccaacacactgatggg 46243
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>gb|AC103784.2| Homo sapiens chromosome 8, clone RP11-715C17, complete sequence
          Length = 175745

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    tgcaccaaagaaaataaca 62
             |||||||||||||||||||
Sbjct: 42154 tgcaccaaagaaaataaca 42136
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>gb|AC158674.10| Mus musculus 6 BAC RP23-54E12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 211124

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    catcttgctcatctataaa 85
             |||||||||||||||||||
Sbjct: 30283 catcttgctcatctataaa 30301
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>dbj|AK134305.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030404E18 product:hypothetical
            protein, full insert sequence
          Length = 2512

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   tacagtgaaagatgcacca 50
            |||||||||||||||||||
Sbjct: 1252 tacagtgaaagatgcacca 1270
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>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     agaaaataacagcaacatc 70
              |||||||||||||||||||
Sbjct: 171793 agaaaataacagcaacatc 171811
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>gb|AC096638.2| Homo sapiens chromosome 1 clone RP11-224O19, complete sequence
          Length = 185784

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 161   attgcagaggaagggaaca 179
             |||||||||||||||||||
Sbjct: 55387 attgcagaggaagggaaca 55405
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>gb|AC023405.6| Homo sapiens chromosome 8, clone RP11-199K17, complete sequence
          Length = 151859

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tgcaccaaagaaaataaca 62
             |||||||||||||||||||
Sbjct: 89433 tgcaccaaagaaaataaca 89451
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 43       atgcaccaaagaaaataac 61
                |||||||||||||||||||
Sbjct: 17831030 atgcaccaaagaaaataac 17831012
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 62       agcaacatcttgctcatct 80
                |||||||||||||||||||
Sbjct: 16841076 agcaacatcttgctcatct 16841094
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>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence
          Length = 161391

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 26     aagacgtacagtgaaagatgcac 48
              |||||||||||||||||| ||||
Sbjct: 137269 aagacgtacagtgaaagaggcac 137247
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>gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complete sequence
          Length = 164846

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     atctataaatagtatagga 95
              |||||||||||||||||||
Sbjct: 114862 atctataaatagtatagga 114844
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>ref|XM_220636.3| PREDICTED: Rattus norvegicus similar to CG14967-PA (predicted)
            (LOC303280), mRNA
          Length = 7452

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 87   agtataggagagctgtttg 105
            |||||||||||||||||||
Sbjct: 4069 agtataggagagctgtttg 4051
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>gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, complete sequence
          Length = 154898

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 169    ggaagggaacaagaaaagg 187
              |||||||||||||||||||
Sbjct: 121266 ggaagggaacaagaaaagg 121248
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>dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-122K03,
             complete sequence
          Length = 173324

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    agagctgtttgggttttct 113
             |||||||||||||||||||
Sbjct: 16656 agagctgtttgggttttct 16674
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>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0683C09
          Length = 185139

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    atgcaccaaagaaaataac 61
             |||||||||||||||||||
Sbjct: 58022 atgcaccaaagaaaataac 58004
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>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0025G03
          Length = 139560

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    agcaacatcttgctcatct 80
             |||||||||||||||||||
Sbjct: 71234 agcaacatcttgctcatct 71252
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>dbj|AK069694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027L06, full
           insert sequence
          Length = 3018

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 43  atgcaccaaagaaaataac 61
           |||||||||||||||||||
Sbjct: 940 atgcaccaaagaaaataac 958
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>gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, complete sequence
          Length = 212696

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     catcttgctcatctataaa 85
              |||||||||||||||||||
Sbjct: 209886 catcttgctcatctataaa 209904
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>gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, complete sequence
          Length = 164455

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     catcttgctcatctataaa 85
              |||||||||||||||||||
Sbjct: 104339 catcttgctcatctataaa 104357
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>gb|AC007792.1|AC007792 Homo sapiens chromosome 19, cosmid R29694, complete sequence
          Length = 37655

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaagaaaataacagcaaca 68
             |||||||||||||||||||
Sbjct: 14540 aaagaaaataacagcaaca 14558
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>emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-828K24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174318

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    catcttgctcatctataaa 85
             |||||||||||||||||||
Sbjct: 35306 catcttgctcatctataaa 35288
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>emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-796G6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203108

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    aagaaaataacagcaacat 69
             |||||||||||||||||||
Sbjct: 60940 aagaaaataacagcaacat 60958
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>emb|BX005373.14| Zebrafish DNA sequence from clone DKEY-221M4 in linkage group 25,
             complete sequence
          Length = 107914

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    ggagagctgtttgggtttt 111
             |||||||||||||||||||
Sbjct: 17464 ggagagctgtttgggtttt 17482
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>emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 in linkage group 10,
             complete sequence
          Length = 184574

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   ctcggaagttaccaacaca 130
             |||||||||||||||||||
Sbjct: 27733 ctcggaagttaccaacaca 27751
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>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17,
             complete sequence
          Length = 165991

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 171   aagggaacaagaaaagggc 189
             |||||||||||||||||||
Sbjct: 57760 aagggaacaagaaaagggc 57742
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>emb|AL954861.11| Zebrafish DNA sequence from clone CH211-8I17, complete sequence
          Length = 175026

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 156    atgagattgcagaggaagg 174
              |||||||||||||||||||
Sbjct: 172064 atgagattgcagaggaagg 172082
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>gb|M87843.1|HUMTGFBET2 Human transforming growth factor beta-2 gene, 5' end
          Length = 5579

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 161  attgcagaggaagggaaca 179
            |||||||||||||||||||
Sbjct: 4956 attgcagaggaagggaaca 4974
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>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete
             sequence
          Length = 190178

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaagaaaataacagcaaca 68
             |||||||||||||||||||
Sbjct: 58456 aaagaaaataacagcaaca 58474
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>emb|AJ007302.1|SSC7302 Sus scrofa triadin gene
          Length = 15604

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 55   aaataacagcaacatcttg 73
            |||||||||||||||||||
Sbjct: 1132 aaataacagcaacatcttg 1114


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,153,199
Number of Sequences: 3902068
Number of extensions: 2153199
Number of successful extensions: 154007
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153769
Number of HSP's gapped (non-prelim): 238
length of query: 195
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 173
effective length of database: 17,147,199,772
effective search space: 2966465560556
effective search space used: 2966465560556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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