ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl10c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 42 0.75
2dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0... 42 0.75
3ref|XM_518367.1| PREDICTED: Pan troglodytes similar to Helicase ... 40 3.0
4ref|NM_006929.4| Homo sapiens superkiller viralicidic activity 2... 40 3.0
5gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 3.0
6gb|AF019413.1|HSMHCT8S22 Homo sapiens HLA class III region conta... 40 3.0
7gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility l... 40 3.0
8gb|BC015758.1| Homo sapiens superkiller viralicidic activity 2-l... 40 3.0
9ref|NM_021337.2| Mus musculus superkiller viralicidic activity 2... 40 3.0
10gb|BC062925.1| Mus musculus superkiller viralicidic activity 2-l... 40 3.0
11emb|Z67880.1|CEC34E7 Caenorhabditis elegans Cosmid C34E7, comple... 40 3.0
12emb|AL662849.8| Human DNA sequence from clone XXbac-116I9 on chr... 40 3.0
13gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete se... 40 3.0
14emb|AL844853.23| Human DNA sequence from clone DAQB-331I12 on ch... 40 3.0
15ref|NG_000013.2| Homo sapiens MHC class III complement gene clus... 40 3.0
16gb|BC065999.1| Mus musculus superkiller viralicidic activity 2-l... 40 3.0
17emb|CR753845.11| Human DNA sequence from clone DADB-112B14 on ch... 40 3.0
18emb|BX883045.1| Rattus norvegicus chromosome 20, major histocomp... 40 3.0
19emb|AL645922.11| Human DNA sequence from clone XXbac-116M5 on ch... 40 3.0
20emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 ... 40 3.0
21emb|CR759782.7| Human DNA sequence from clone DAMC-178C20 on chr... 40 3.0
22emb|CR788238.10| Human DNA sequence from clone DAMC-45E14 on chr... 40 3.0
23emb|CR753822.3| Human DNA sequence from clone DASS-264H16 on chr... 40 3.0
24emb|CR616648.1| full-length cDNA clone CS0CAP003YA05 of Thymus o... 40 3.0
25gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, comple... 40 3.0
26gb|AC093906.3| Homo sapiens BAC clone RP11-742B18 from 4, comple... 40 3.0
27dbj|AK139051.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 3.0
28ref|NG_004658.1| Homo sapiens MHC class III complement gene clus... 40 3.0
29dbj|AK159854.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 3.0
30dbj|AK029763.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 3.0
31gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-3... 40 3.0
32gb|BC023478.1| Mus musculus superkiller viralicidic activity 2-l... 40 3.0
33ref|NG_005163.1| Homo sapiens MHC class III complement gene clus... 40 3.0
34dbj|AK087810.1| Mus musculus 2 days pregnant adult female ovary ... 40 3.0
35gb|U09877.1|HSU09877 Human helicase-like protein (HLP) mRNA, com... 40 3.0
36gb|AF163151.2|AF163151 Homo sapiens dentin sialophosphoprotein p... 40 3.0
37ref|NM_213559.1| Rattus norvegicus superkiller viralicidic activ... 40 3.0
38gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, c... 40 3.0
39emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chr... 40 3.0
40gb|AF059675.1|AF059675 Homo sapiens putative RNA helicase Ski2w ... 40 3.0
41emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on ch... 40 3.0
42gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 40 3.0
43dbj|AB209605.1| Homo sapiens mRNA for DJ34F7.7 (Superkiller vira... 40 3.0
44emb|Z48796.1|HSSKIWMR H.sapiens Ski-W mRNA for helicase 40 3.0
45emb|X98378.1|HSSKI2WGN H.sapiens SKI2W gene 40 3.0

>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 48      ctgataattataccaaacttt 68
               |||||||||||||||||||||
Sbjct: 1401026 ctgataattataccaaacttt 1401046



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>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence
          Length = 124602

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    tcttatcaaagtcgaaaacaa 174
              |||||||||||||||||||||
Sbjct: 118575 tcttatcaaagtcgaaaacaa 118595



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>ref|XM_518367.1| PREDICTED: Pan troglodytes similar to Helicase SKI2W (Helicase-like
           protein) (HLP) (LOC462574), mRNA
          Length = 455

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  tcatgtttgacaatgcactg 95
           ||||||||||||||||||||
Sbjct: 227 tcatgtttgacaatgcactg 246



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>ref|NM_006929.4| Homo sapiens superkiller viralicidic activity 2-like (S. cerevisiae)
            (SKIV2L), mRNA
          Length = 4187

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3670 tcatgtttgacaatgcactg 3689



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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tttgacaatgcactgctgat 100
              ||||||||||||||||||||
Sbjct: 495988 tttgacaatgcactgctgat 496007



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>gb|AF019413.1|HSMHCT8S22 Homo sapiens HLA class III region containing tenascin X (tenascin-X)
             gene, partial cds; cytochrome P450 21-hydroxylase
             (CYP21B), complement component C4 (C4B) G11, helicase
             (SKI2W), RD, complement factor B (Bf), and  complement
             component C2 (C2) genes, complete cds
          Length = 109646

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 56573 tcatgtttgacaatgcactg 56554



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>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement
              C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A)
              genes, complete cds; slp pseudogene, complete sequence;
              NG6, SKI, and complement factor B (Bf) genes, complete cds;
              and complement factor C2 (C2) gene, partial cds
          Length = 149886

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     tcatgtttgacaatgcactg 95
              ||||||||||||||||||||
Sbjct: 114615 tcatgtttgacaatgcactg 114596



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>gb|BC015758.1| Homo sapiens superkiller viralicidic activity 2-like (S. cerevisiae),
            mRNA (cDNA clone MGC:23108 IMAGE:4874270), complete cds
          Length = 3818

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3283 tcatgtttgacaatgcactg 3302



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>ref|NM_021337.2| Mus musculus superkiller viralicidic activity 2-like (S. cerevisiae )
            (Skiv2l), mRNA
          Length = 3972

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3324 tcatgtttgacaatgcactg 3343



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>gb|BC062925.1| Mus musculus superkiller viralicidic activity 2-like (S. cerevisiae
            ), mRNA (cDNA clone IMAGE:6850994), partial cds
          Length = 4010

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3379 tcatgtttgacaatgcactg 3398



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>emb|Z67880.1|CEC34E7 Caenorhabditis elegans Cosmid C34E7, complete sequence
          Length = 27008

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   atcaaagtcgaaaacaaaga 177
             ||||||||||||||||||||
Sbjct: 22125 atcaaagtcgaaaacaaaga 22106



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>emb|AL662849.8| Human DNA sequence from clone XXbac-116I9 on chromosome 6 contains the
             C2 gene for complement component 2, the Bf gene for
             B-factor, properdin, the RDBP gene for RD RNA-binding
             protein, the SKIV2L gene for superkiller viralicidic
             activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3
             homolog Z (C. elegans), the STK19 gene for
             serine/threonine kinase 19, the C4A gene for complement
             component 4B, the 3' end of the CYP21A2 gene for
             cytochrome P450, subfamily XXIA (steroid 21-hydroxylase,
             congenital adrenal hyperplasia), polypeptide 2 and four
             CpG islands, complete sequence
          Length = 88459

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 55138 tcatgtttgacaatgcactg 55157



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>gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete sequence
          Length = 106540

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   aaagttacactcttatcaaa 163
             ||||||||||||||||||||
Sbjct: 92380 aaagttacactcttatcaaa 92361



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>emb|AL844853.23| Human DNA sequence from clone DAQB-331I12 on chromosome 6 Contains the
              NEU1 gene for sialidase 1 (lysosomal sialidase), the
              C6orf29 gene for chromosome 6 open reading frame 29, the
              BAT8 gene for HLA-B associated transcript 8, a novel
              transcript DAQB-331I12.5, the ZBTB12 gene (previously
              C6orf46) for zinc finger and BTB domain containing 12, the
              C2 gene for complement component 2, the Bf gene for
              B-factor, properdin, the RDBP gene for RD RNA binding
              protein, the SKIV2L gene for superkiller viralicidic
              activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3
              homolog Z (C. elegans), the STK19 gene for serine/threonine
              kinase 19, the 5' end of the C4A gene for complement
              component 4A and 8 CpG isalnds, complete sequence
          Length = 153464

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     tcatgtttgacaatgcactg 95
              ||||||||||||||||||||
Sbjct: 123094 tcatgtttgacaatgcactg 123113



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>ref|NG_000013.2| Homo sapiens MHC class III complement gene cluster, monomodular haplotype
              (MCGC@) on chromosome 6
          Length = 180017

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     tcatgtttgacaatgcactg 95
              ||||||||||||||||||||
Sbjct: 126944 tcatgtttgacaatgcactg 126925



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>gb|BC065999.1| Mus musculus superkiller viralicidic activity 2-like (S. cerevisiae
            ), mRNA (cDNA clone MGC:90095 IMAGE:5686586), complete
            cds
          Length = 3939

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3296 tcatgtttgacaatgcactg 3315



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>emb|CR753845.11| Human DNA sequence from clone DADB-112B14 on chromosome 6, complete
             sequence
          Length = 96090

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 14098 tcatgtttgacaatgcactg 14117



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>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 4/11
          Length = 346406

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 28259 tcatgtttgacaatgcactg 28240



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>emb|AL645922.11| Human DNA sequence from clone XXbac-116M5 on chromosome 6 contains the
             C2 gene for complement component 2 (C2, CO2), the Bf gene
             for B-factor, properdin (Bf, GBG, CFAB, PBF2), the RDBP
             gene for RD RNA-binding protein (RDBP, RD, RDP, D6S45,
             NELF-E), the SKIV2L gene for superkiller viralicidic
             activity 2-like (S. cerevisiae) (SKIV2L, HLP, SKI2, DDX13,
             SKI2W, SKIV2), the DOM3Z gene for dom-3 homolog Z (C.
             elegans) (DOM3Z, NG6, DOM3L), the STK19 gene for
             serine/threonine kinase 19 (STK19, G11, RP1, D6S60,
             D6S60E, HLA-RP1), the C4A gene for complement component 4A
             (C4A, C4S, CO4), a cytochrome P450, subfamily XXIA
             (steroid 21-hydroxylase), polypeptide 1 pseudogene
             (CYP21A1P), a tenascin XA pseudogene (TNXA, XA, XB, TNX,
             HXBL, D6S103E), a serine/threonine kinase 19 (STK19, G11,
             RP1, D6S60, D6S60E, HLA-RP1) pseudogene, the C4B gene for
             complement component 4B (C4B, C4F, CO4), the CYP21A2 gene
             for cytochrome P450, subfamily XXIA (steroid
             21-hydroxylase, congenital adrenal hyperplasia),
             polypeptide 2 (CYP21A2, CAH1, CPS1, CA21H, CYP21, CYP21B,
             P450c21B), the 3' end of the TNXB gene for tenascin XB
             (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS) and
             four CpG islands, complete sequence
          Length = 180559

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 65237 tcatgtttgacaatgcactg 65256



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>emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 on chromosome 6p21.2-21.33
              Contains the 3' end of the gene for CREB-RP (G13), the gene
              for tenascin XB and XA, the CYP21A2 gene for cytochrome
              P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide
              2 (CYP21, P450c21B), the C4A gene for complement component
              4A, the gene for RP MHC class III complement protein (G11),
              the DOM3Z gene for DOM-3 (C. elegans) homolog Z, the SKIV2L
              gene for superkiller viralicidic activity 2 (S. cerevisiae
              homolog)-like (SKI2W) and the gene for RD (RDBP). Contains
              ESTs, STSs, GSSs and five putative CpG islands, complete
              sequence
          Length = 129811

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     tcatgtttgacaatgcactg 95
              ||||||||||||||||||||
Sbjct: 117007 tcatgtttgacaatgcactg 116988



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>emb|CR759782.7| Human DNA sequence from clone DAMC-178C20 on chromosome 6, complete
             sequence
          Length = 79825

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 66745 tcatgtttgacaatgcactg 66764



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>emb|CR788238.10| Human DNA sequence from clone DAMC-45E14 on chromosome 6, complete
            sequence
          Length = 108340

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 2849 tcatgtttgacaatgcactg 2830



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>emb|CR753822.3| Human DNA sequence from clone DASS-264H16 on chromosome 6, complete
            sequence
          Length = 10388

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 5250 tcatgtttgacaatgcactg 5269



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>emb|CR616648.1| full-length cDNA clone CS0CAP003YA05 of Thymus of Homo sapiens
          (human)
          Length = 518

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 tcatgtttgacaatgcactg 95
          ||||||||||||||||||||
Sbjct: 22 tcatgtttgacaatgcactg 41



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>gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, complete sequence
          Length = 171135

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    attccaagatggttatcaccgttt 39
             |||||| |||||||||||||||||
Sbjct: 11929 attccatgatggttatcaccgttt 11906



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>gb|AC093906.3| Homo sapiens BAC clone RP11-742B18 from 4, complete sequence
          Length = 189286

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     attccaagatggttatcaccgttt 39
              |||||| |||||||||||||||||
Sbjct: 123576 attccatgatggttatcaccgttt 123553



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>dbj|AK139051.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730004N10 product:Similar to
            superkiller viralicidic activity 2-like (S. cerevisiae)
            (Fragment) homolog [Mus musculus], full insert sequence
          Length = 4121

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3398 tcatgtttgacaatgcactg 3417



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>ref|NG_004658.1| Homo sapiens MHC class III complement gene cluster, bimodular haplotype
             (MCGC2@) on chromosome 6
          Length = 201523

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 41755 tcatgtttgacaatgcactg 41774



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>dbj|AK159854.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420034G16 product:Superkiller viralicidic
            activity 2-like, full insert sequence
          Length = 3966

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3325 tcatgtttgacaatgcactg 3344



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>dbj|AK029763.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930534J06 product:superkiller viralicidic
            activity 2-like (S. cerevisiae ), full insert sequence
          Length = 3907

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3313 tcatgtttgacaatgcactg 3332



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>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete
             sequence
          Length = 113812

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   aaagttacactcttatcaaa 163
             ||||||||||||||||||||
Sbjct: 94991 aaagttacactcttatcaaa 95010



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>gb|BC023478.1| Mus musculus superkiller viralicidic activity 2-like (S. cerevisiae
            ), mRNA (cDNA clone IMAGE:5007559), partial cds
          Length = 2541

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 1928 tcatgtttgacaatgcactg 1947



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>ref|NG_005163.1| Homo sapiens MHC class III complement gene cluster, monomodular
             haplotype (MCGC3@) on chromosome 6
          Length = 164376

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 41755 tcatgtttgacaatgcactg 41774



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>dbj|AK087810.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330024C01
            product:superkiller viralicidic activity 2-like (S.
            cerevisiae ), full insert sequence
          Length = 4528

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3960 tcatgtttgacaatgcactg 3979



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>gb|U09877.1|HSU09877 Human helicase-like protein (HLP) mRNA, complete cds
          Length = 3909

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3392 tcatgtttgacaatgcactg 3411



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>gb|AF163151.2|AF163151 Homo sapiens dentin sialophosphoprotein precursor (DSPP) gene,
            complete cds
          Length = 9944

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 16   attccaagatggttatcaccgttt 39
            |||||| |||||||||||||||||
Sbjct: 2460 attccatgatggttatcaccgttt 2437



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>ref|NM_213559.1| Rattus norvegicus superkiller viralicidic activity 2-like (Skiv2l),
            mRNA
          Length = 3770

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3310 tcatgtttgacaatgcactg 3329



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>gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, complete sequence
          Length = 41330

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atcctttttgcattccaaga 24
             ||||||||||||||||||||
Sbjct: 30297 atcctttttgcattccaaga 30316



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>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete
             sequence
          Length = 216656

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acagataaagttacactctt 157
             ||||||||||||||||||||
Sbjct: 39645 acagataaagttacactctt 39626



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>gb|AF059675.1|AF059675 Homo sapiens putative RNA helicase Ski2w (SKI2W) gene, complete cds
          Length = 11008

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 9912 tcatgtttgacaatgcactg 9931



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>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete
             sequence
          Length = 171682

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tcatgtttgacaatgcactg 95
             ||||||||||||||||||||
Sbjct: 68143 tcatgtttgacaatgcactg 68124



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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tttgacaatgcactgctgat 100
              ||||||||||||||||||||
Sbjct: 428871 tttgacaatgcactgctgat 428890



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>dbj|AB209605.1| Homo sapiens mRNA for DJ34F7.7 (Superkiller viralicidic activity 2
            -like variant protein
          Length = 4497

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3910 tcatgtttgacaatgcactg 3929



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>emb|Z48796.1|HSSKIWMR H.sapiens Ski-W mRNA for helicase
          Length = 3874

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3333 tcatgtttgacaatgcactg 3352



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>emb|X98378.1|HSSKI2WGN H.sapiens SKI2W gene
          Length = 3796

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tcatgtttgacaatgcactg 95
            ||||||||||||||||||||
Sbjct: 3286 tcatgtttgacaatgcactg 3305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,132,776
Number of Sequences: 3902068
Number of extensions: 2132776
Number of successful extensions: 34754
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34687
Number of HSP's gapped (non-prelim): 67
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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