>gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete sequence
          Length = 82312

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   atcttggttatccttctccat 165
             |||||||||||||||||||||
Sbjct: 35053 atcttggttatccttctccat 35073

>dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F8N14
          Length = 68639

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   tgatcaccatcttggttatcc 157
             |||||||||||||||||||||
Sbjct: 44340 tgatcaccatcttggttatcc 44360

>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence
          Length = 182677

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     cagaaaaaacacagaaccaa 101
              ||||||||||||||||||||
Sbjct: 112505 cagaaaaaacacagaaccaa 112524

>emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, complete sequence
          Length = 148950

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gcagtcttgcacaactgctttgaa 270
             |||||||||||||| |||||||||
Sbjct: 11943 gcagtcttgcacaagtgctttgaa 11966

>gb|AC100724.10| Mus musculus chromosome 17, clone RP24-120E11, complete sequence
          Length = 179334

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     gggagtactttgcataacagaatc 33
              ||||||||||||||||| ||||||
Sbjct: 160329 gggagtactttgcataaaagaatc 160352

>gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, complete sequence
          Length = 191988

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     taaacagaaaaaacacagaa 97
              ||||||||||||||||||||
Sbjct: 148060 taaacagaaaaaacacagaa 148079

>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 88235 acaggcaaaacaaacagaaa 88254

>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13,
             complete sequence
          Length = 79528

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aaacagaaaaaacacagaaccaaa 102
             ||||||||||||||||||| ||||
Sbjct: 62337 aaacagaaaaaacacagaaacaaa 62314

>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the
             5' end of the CDKN2B gene for cyclin-dependent kinase
             inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52
             residue ribosomal protein fusion product 1 (UBA52) (RPL40)
             pseudogene, the 3' end of a variant of the MTAP gene for
             methylthioadenosine phosphorylase (MSAP), a novel gene and
             a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gcagtcttgcacaactgctttgaa 270
             |||||||||||||| |||||||||
Sbjct: 29581 gcagtcttgcacaagtgctttgaa 29604

>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2
             Contains the 3' end of the PTGFR gene for prostaglandin,
             complete sequence
          Length = 135758

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   gataatgaaaaaattgcagt 251
             ||||||||||||||||||||
Sbjct: 94397 gataatgaaaaaattgcagt 94378

>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3,
             complete sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   actacaggcaaaacaaacagaaag 131
             ||||||||||||||||||| ||||
Sbjct: 37252 actacaggcaaaacaaacacaaag 37275

>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3,
             complete sequence
          Length = 199512

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   actacaggcaaaacaaacagaaag 131
             ||||||||||||||||||| ||||
Sbjct: 34338 actacaggcaaaacaaacacaaag 34361

>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tccttctccataactccctt 174
              ||||||||||||||||||||
Sbjct: 107097 tccttctccataactccctt 107116

>gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 220   attggaaagacagataatgaaaaa 243
             |||||||||||||||| |||||||
Sbjct: 36926 attggaaagacagatattgaaaaa 36949

>gb|AF274567.1|AF274567 Paramecium primaurelia G surface antigen pseudogene, complete
            sequence
          Length = 7744

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6165 cttgcacaactgctttgaat 6184

>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone
              BACR12P10, complete sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    attggaaagacagataatgaaaaa 243
              |||||||| |||||||||||||||
Sbjct: 170313 attggaaaaacagataatgaaaaa 170336

>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence
          Length = 211243

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    aaacagaaagttccatgatc 141
              ||||||||||||||||||||
Sbjct: 113295 aaacagaaagttccatgatc 113314

>gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163157

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   tggaaagacagataatgaaa 241
             ||||||||||||||||||||
Sbjct: 97782 tggaaagacagataatgaaa 97763

>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
              BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    acaggcaaaacaaacagaaa 130
              ||||||||||||||||||||
Sbjct: 117834 acaggcaaaacaaacagaaa 117853

>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete
              sequence
          Length = 247876

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    attggaaagacagataatgaaaaa 243
              |||||||| |||||||||||||||
Sbjct: 228472 attggaaaaacagataatgaaaaa 228495



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 13296 acaggcaaaacaaacagaaa 13315

>gb|AC154211.1| Mus musculus BAC clone RP24-113P8 from 17, complete sequence
          Length = 146732

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 10     gggagtactttgcataacagaatc 33
              ||||||||||||||||| ||||||
Sbjct: 134923 gggagtactttgcataaaagaatc 134900

>gb|BC067641.1| Danio rerio signal recognition particle 72, mRNA (cDNA clone
            IMAGE:6962108), partial cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  caggcaaaacaaacagaaag 131
            ||||||||||||||||||||
Sbjct: 2233 caggcaaaacaaacagaaag 2214

>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 172     cttttttctcataggtgact 191
               ||||||||||||||||||||
Sbjct: 1714382 cttttttctcataggtgact 1714363

>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete
             sequence
          Length = 175057

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atcactacaggcaaaacaaa 124
             ||||||||||||||||||||
Sbjct: 73694 atcactacaggcaaaacaaa 73713

>emb|X03882.1|PPSGP Paramecium primaurelia gene for G surface protein
          Length = 8548

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6859 cttgcacaactgctttgaat 6878

>emb|X52133.1|PP168G Paramecium 168G gene for 168G surface protein
          Length = 8511

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6821 cttgcacaactgctttgaat 6840

>emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on chromosome 4, complete
             sequence
          Length = 64760

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 40763 acaggcaaaacaaacagaaa 40782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,707,491
Number of Sequences: 3902068
Number of extensions: 3707491
Number of successful extensions: 90321
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90257
Number of HSP's gapped (non-prelim): 64
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)