ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5... 44 9e-05
2ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asp... 38 0.006
3ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asp... 38 0.006
4ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-... 37 0.018
5ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asp... 36 0.030
6ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asp... 34 0.088

>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)|
           (L-asparagine amidohydrolase 2) [Contains:
           L-asparaginase 2 alpha subunit; L-asparaginase 2 beta
           subunit]
          Length = 325

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 235 GMFRGCATEDGFMEVGIWE 179
           GMFRGCATEDGFMEV IWE
Sbjct: 307 GMFRGCATEDGFMEVAIWE 325



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>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -2

Query: 238 TGMFRGCATEDGFMEVGIW 182
           TGMFR CATEDG+ E+ IW
Sbjct: 304 TGMFRACATEDGYSEIAIW 322



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>ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -2

Query: 238 TGMFRGCATEDGFMEVGIW 182
           TGMFR CATEDG+ E+ IW
Sbjct: 304 TGMFRACATEDGYSEIAIW 322



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>ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase 1) [Contains: L-asparaginase 1 alpha
           subunit; L-asparaginase 1 beta subunit]
          Length = 315

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 238 TGMFRGCATEDGFMEVGIW 182
           TGMFR CA+EDG+ E+ IW
Sbjct: 294 TGMFRACASEDGYSEIAIW 312



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>ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit] (Fragment)
          Length = 306

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -2

Query: 238 TGMFRGCATEDGFMEVGIW 182
           TGMFR CATEDG  E+ IW
Sbjct: 285 TGMFRACATEDGNSEIAIW 303



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>ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 238 TGMFRGCATEDGFMEVGIW 182
           TGMFR  ATEDG+ E+ IW
Sbjct: 304 TGMFRASATEDGYSEIAIW 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,752,244
Number of Sequences: 219361
Number of extensions: 534351
Number of successful extensions: 1234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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