>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 311  ttaactgcctcccttctgcttgagg 335
            |||||||||||||||||||||||||
Sbjct: 3111 ttaactgcctcccttctgcttgagg 3087

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 311      ttaactgcctcccttctgcttgagg 335
                |||||||||||||||||||||||||
Sbjct: 10020837 ttaactgcctcccttctgcttgagg 10020861

>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 311    ttaactgcctcccttctgcttgagg 335
              |||||||||||||||||||||||||
Sbjct: 101119 ttaactgcctcccttctgcttgagg 101143

>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 311   ttaactgcctcccttctgcttgagg 335
             |||||||||||||||||||||||||
Sbjct: 48394 ttaactgcctcccttctgcttgagg 48418

>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 311    ttaactgcctcccttctgcttgagg 335
              |||||||||||||||||||||||||
Sbjct: 115330 ttaactgcctcccttctgcttgagg 115354

>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 276   ctacatgacacaattgcaacagattg 301
             |||||||| |||||||||||||||||
Sbjct: 20673 ctacatgagacaattgcaacagattg 20648

>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 201   taatcttttgtatattataaaaacatctt 229
             ||||||||||||||| |||| ||||||||
Sbjct: 98214 taatcttttgtatataataataacatctt 98186

>gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 129 of 218 of the
            complete genome
          Length = 11901

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   gttttttgtcaaaaaaggcct 85
            |||||||||||||||||||||
Sbjct: 4932 gttttttgtcaaaaaaggcct 4912

>gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51315

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tcttctcatccctctctttaa 203
             |||||||||||||||||||||
Sbjct: 29023 tcttctcatccctctctttaa 29043

>gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence
          Length = 39112

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    cgaaatacagtatctcaatcc 26
            |||||||||||||||||||||
Sbjct: 5828 cgaaatacagtatctcaatcc 5808

>emb|AL512505.8| Human DNA sequence from clone RP11-87H20 on chromosome 13 Contains the
             5' end of the COG6 gene for component of oligomeric golgi
             complex 6 (KIAA1134, COD2) and a CpG island, complete
             sequence
          Length = 117522

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 206   ttttgtatattataaaaacatcttt 230
             |||||| ||||||||||||||||||
Sbjct: 20368 ttttgtttattataaaaacatcttt 20392

>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence
          Length = 101116

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 177   tcttcctcttctcatccctct 197
             |||||||||||||||||||||
Sbjct: 82774 tcttcctcttctcatccctct 82794

>gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, complete sequence
          Length = 169579

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   cctcttctcatccctctcttt 201
             |||||||||||||||||||||
Sbjct: 41686 cctcttctcatccctctcttt 41706

>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence
          Length = 170801

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 177  tcttcctcttctcatccctct 197
            |||||||||||||||||||||
Sbjct: 7996 tcttcctcttctcatccctct 8016

>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 201    taatcttttgtatattataaaaacatctt 229
              ||||||||||||||| |||| ||||||||
Sbjct: 217527 taatcttttgtatataataataacatctt 217555

>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   atgacacaattgcaacagatt 300
             |||||||||||||||||||||
Sbjct: 73824 atgacacaattgcaacagatt 73844

>gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, complete cds
          Length = 987

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  atggaagggagttgggagag 109
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117

>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence
          Length = 209579

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tcttcctcttctcatccctc 196
             ||||||||||||||||||||
Sbjct: 64584 tcttcctcttctcatccctc 64565

>emb|CR352303.12| Zebrafish DNA sequence from clone CH211-157C9 in linkage group 5,
            complete sequence
          Length = 45283

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  tctttaatcttttgtatatt 216
            ||||||||||||||||||||
Sbjct: 8109 tctttaatcttttgtatatt 8128

>emb|BX897739.8| Zebrafish DNA sequence from clone CH211-160J20 in linkage group 14,
              complete sequence
          Length = 162410

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    tctttaatcttttgtatatt 216
              ||||||||||||||||||||
Sbjct: 111822 tctttaatcttttgtatatt 111803



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   tctttaatcttttgtatatt 216
             ||||||||||||||||||||
Sbjct: 82270 tctttaatcttttgtatatt 82251

>emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in linkage group 4 Contains
             the gene for a novel protein similar to vertebrate pim-1
             oncogene (PIM1) and two CpG islands, complete sequence
          Length = 146489

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tctttaatcttttgtatatt 216
             ||||||||||||||||||||
Sbjct: 94827 tctttaatcttttgtatatt 94846

>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17,
             complete sequence
          Length = 155243

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tctttaatcttttgtatatt 216
             ||||||||||||||||||||
Sbjct: 80077 tctttaatcttttgtatatt 80096

>emb|BX649454.14| Zebrafish DNA sequence from clone DKEYP-100H4 in linkage group 14,
              complete sequence
          Length = 167507

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    tctttaatcttttgtatatt 216
              ||||||||||||||||||||
Sbjct: 163792 tctttaatcttttgtatatt 163811

>emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 in linkage group 10,
            complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   atggaagggagttgggagag 109
            ||||||||||||||||||||
Sbjct: 2324 atggaagggagttgggagag 2343

>gb|AC007584.4| Arabidopsis thaliana chromosome 2 clone MJB20 map mi398, complete
             sequence
          Length = 84592

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tgtatattataaaaacatct 228
             ||||||||||||||||||||
Sbjct: 29782 tgtatattataaaaacatct 29763

>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tcacatctattcttacacca 62
              ||||||||||||||||||||
Sbjct: 114772 tcacatctattcttacacca 114791

>ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  atggaagggagttgggagag 109
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117

>gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone MGC:110381
           IMAGE:7410517), complete cds
          Length = 968

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  atggaagggagttgggagag 109
           ||||||||||||||||||||
Sbjct: 81  atggaagggagttgggagag 100

>gb|AC106892.3| Homo sapiens BAC clone RP11-55L3 from 4, complete sequence
          Length = 164051

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    tcttcctcttctcatccctc 196
              ||||||||||||||||||||
Sbjct: 129969 tcttcctcttctcatccctc 129950

>gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, complete sequence
          Length = 110512

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    acaaacttcacatctattct 55
             ||||||||||||||||||||
Sbjct: 22462 acaaacttcacatctattct 22481

>dbj|AB097140.1| Danio rerio retrotransposon MutsuDr1 DNA, complete sequence
          Length = 5746

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  tctttaatcttttgtatatt 216
            ||||||||||||||||||||
Sbjct: 2784 tctttaatcttttgtatatt 2765

>gb|AY103740.1| Zea mays PCO120652 mRNA sequence
          Length = 1013

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 311 ttaactgcctcccttctgcttgag 334
           ||||||||| ||||||||||||||
Sbjct: 631 ttaactgccacccttctgcttgag 608

>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14,
             complete sequence
          Length = 142230

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tctttaatcttttgtatatt 216
             ||||||||||||||||||||
Sbjct: 72289 tctttaatcttttgtatatt 72308

>dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-628J23, complete
             sequence
          Length = 165097

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   tttaatcttttgtatattataaaa 222
             |||||||| |||||||||||||||
Sbjct: 44630 tttaatctattgtatattataaaa 44607

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     ctctttaatcttttgtatat 215
               ||||||||||||||||||||
Sbjct: 1075424 ctctttaatcttttgtatat 1075443

>emb|AL354819.15| Human DNA sequence from clone RP11-7B3 on chromosome 13 Contains the 3'
             end of the gene for a novel calx-beta domain containing
             protein similar to sea urchin ECM3, a novel gene, a
             phospholipase A2 group XII (PLA2G12) pseudogene and a
             novel KIAA0565 KIAA1074 and breast cancer antigen NY-BR-1
             containing pseudogene, complete sequence
          Length = 153149

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   ttttgtatattataaaaaca 225
             ||||||||||||||||||||
Sbjct: 33345 ttttgtatattataaaaaca 33326

>emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chromosome X, complete
             sequence
          Length = 210533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   ctctctttaatcttttgtat 213
             ||||||||||||||||||||
Sbjct: 95143 ctctctttaatcttttgtat 95124


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,442,475
Number of Sequences: 3902068
Number of extensions: 3442475
Number of successful extensions: 71838
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71731
Number of HSP's gapped (non-prelim): 107
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)