>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence
          Length = 198038

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 277    atagacaaaaatgcacttactgt 299
              |||||||||||||||||||||||
Sbjct: 134150 atagacaaaaatgcacttactgt 134128

>ref|XM_720915.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05538)
            partial mRNA
          Length = 2032

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 132  aataaagtttctaaacataaa 152
            |||||||||||||||||||||
Sbjct: 1329 aataaagtttctaaacataaa 1309

>gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, complete sequence
          Length = 113087

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 312   agatctgcagcttcctgtctg 332
             |||||||||||||||||||||
Sbjct: 41071 agatctgcagcttcctgtctg 41091

>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17,
             complete sequence
          Length = 217707

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   aaagtttctaaacataaacat 155
             |||||||||||||||||||||
Sbjct: 82809 aaagtttctaaacataaacat 82829

>gb|AC147597.2| Gallus gallus BAC clone CH261-100D18 from chromosome unknown, complete
             sequence
          Length = 168372

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   aaaataaagtttctaaacata 150
             |||||||||||||||||||||
Sbjct: 94614 aaaataaagtttctaaacata 94594

>gb|AC147068.3| Pan troglodytes BAC clone RP43-165E11 from 7, complete sequence
          Length = 177119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   aggaaaccaaacacacaagg 243
             ||||||||||||||||||||
Sbjct: 73553 aggaaaccaaacacacaagg 73572

>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence
          Length = 178573

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    aggaaaccaaacacacaagg 243
              ||||||||||||||||||||
Sbjct: 178181 aggaaaccaaacacacaagg 178162

>emb|CR388163.10| Zebrafish DNA sequence from clone CH211-247L8 in linkage group 15,
            complete sequence
          Length = 182247

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  caaaaatgcacttactgtagggct 305
            ||||||| ||||||||||||||||
Sbjct: 1062 caaaaatccacttactgtagggct 1085

>ref|XM_741071.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000007.04.0)
            partial mRNA
          Length = 5178

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  aataaagtttctaaacataa 151
            ||||||||||||||||||||
Sbjct: 4586 aataaagtttctaaacataa 4567

>gb|AC068712.6|AC068712 Homo sapiens chromosome 15 clone CTD-3203H14 map 15q21.3, complete
             sequence
          Length = 176645

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   ggccaactcaacaaaaggctttga 270
             ||||| ||||||||||||||||||
Sbjct: 15691 ggccatctcaacaaaaggctttga 15668

>gb|AC011306.9| Homo sapiens BAC clone RP11-479N15 from 2, complete sequence
          Length = 170101

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   gagaacaccaacataccaaggaaa 229
             |||||||| |||||||||||||||
Sbjct: 12164 gagaacacaaacataccaaggaaa 12141

>gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C6, complete sequence
          Length = 160156

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    aggaaaccaaacacacaagg 243
              ||||||||||||||||||||
Sbjct: 117031 aggaaaccaaacacacaagg 117050

>gb|AC044791.6|AC044791 Homo sapiens chromosome 15 clone RP11-209E8 map 15q21, complete
             sequence
          Length = 171245

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   ggccaactcaacaaaaggctttga 270
             ||||| ||||||||||||||||||
Sbjct: 57741 ggccatctcaacaaaaggctttga 57718

>gb|AC005994.2|AC005994 Homo sapiens PAC clone RP6-116J24 from 14, complete sequence
          Length = 91388

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   aataaagtttctaaacataaacat 155
             ||||||||||| ||||||||||||
Sbjct: 25928 aataaagtttcaaaacataaacat 25951

>dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1133J7, complete
              sequences
          Length = 168406

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    ctaaacataaacatctctaa 161
              ||||||||||||||||||||
Sbjct: 116700 ctaaacataaacatctctaa 116681

>gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complete sequence
          Length = 216389

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   agtgatctaagaaaataaag 138
             ||||||||||||||||||||
Sbjct: 78386 agtgatctaagaaaataaag 78367

>emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in linkage group 15,
             complete sequence
          Length = 96878

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaaatgcacttactgtagggct 305
             ||||||| ||||||||||||||||
Sbjct: 95940 caaaaatccacttactgtagggct 95963

>emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chromosome 4, complete
             sequence
          Length = 222046

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aagaaaataaagtttctaaa 146
             ||||||||||||||||||||
Sbjct: 30214 aagaaaataaagtttctaaa 30195

>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete
              sequence
          Length = 180421

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    ttgacacttgatagacaaaa 286
              ||||||||||||||||||||
Sbjct: 146707 ttgacacttgatagacaaaa 146688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,925,709
Number of Sequences: 3902068
Number of extensions: 3925709
Number of successful extensions: 78988
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78955
Number of HSP's gapped (non-prelim): 33
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)