>Y455_MYCPN (P75328) Hypothetical protein MG320 homolog (H08_orf287)|
          Length = 287

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 263 SIWGRGTIPSQSRRLEQSRTVARRF 337
           ++WG   +PSQ RR +Q++T+ R F
Sbjct: 148 TVWGLSALPSQQRRYQQTQTLFRIF 172

>ITA3_MOUSE (Q62470) Integrin alpha-3 precursor (Galactoprotein B3) (GAPB3)|
           (VLA-3 alpha chain) (CD49c antigen) [Contains: Integrin
           alpha-3 heavy chain; Integrin alpha-3 light chain]
          Length = 1053

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 368 ENSSEPVDCERSDGQRSETVLTAVIGRGSCLFPRC 264
           + SS PV    +   +SETVLT   GR  C++  C
Sbjct: 884 DQSSPPVTLAAAKKAKSETVLTCSNGRARCVWLEC 918

>Y320_MYCGE (P47562) Hypothetical protein MG320|
          Length = 286

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 263 SIWGRGTIPSQSRRLEQSRTV 325
           S+WG   +PSQ RR +Q++T+
Sbjct: 149 SVWGLSALPSQKRRYQQTQTL 169

>SNX19_HUMAN (Q92543) Sorting nexin-19|
          Length = 992

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/62 (25%), Positives = 22/62 (35%)
 Frame = -1

Query: 201 ENGRAWVTFCSAALNHPISHIPGCLCTYKLIIARALQLGHKYSNRLARDSPAYILAELYL 22
           E    W  +C A   HP  H P    TY   +   L  G      L   +  +++ EL  
Sbjct: 184 EPSHLWEAYCRATAPHPAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVELIT 243

Query: 21  VN 16
            N
Sbjct: 244 CN 245

>ITA3_CRIGR (P17852) Integrin alpha-3 precursor (Galactoprotein B3) (GAPB3)|
           (VLA-3 alpha chain) (CD49c antigen) [Contains: Integrin
           alpha-3 heavy chain; Integrin alpha-3 light chain]
          Length = 1066

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 368 ENSSEPVDCERSDGQRSETVLTAVIGRGSCLFPRC 264
           +  S PV    +   +SETVLT   GR  C++  C
Sbjct: 882 DQGSPPVTLAAAKKAKSETVLTCASGRARCVWLEC 916

>METX_MYCLE (O32874) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 382

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 206 AGHLKTRARQQATYPSDPPSIWGRGTIPSQSRRLEQSRTVARRFAH 343
           A  + T+  Q A   +DP   W  G      R  E   T+ARRFAH
Sbjct: 188 ADQIGTQTTQIAAIKTDPN--WQGGDYYETGRAPENGLTIARRFAH 231

>AA2AR_HUMAN (P29274) Adenosine A2a receptor|
          Length = 412

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
 Frame = +2

Query: 185 QARPFSFAGHLKTRARQQATYPSD-----------PPSIWGRGTIPSQSRR 304
           Q  PF  AG   T AR  A + SD           PP +W  G+ P   RR
Sbjct: 310 QQEPFKAAG---TSARVLAAHGSDGEQVSLRLNGHPPGVWANGSAPHPERR 357

>GMIP_MOUSE (Q6PGG2) GEM-interacting protein (GMIP)|
          Length = 971

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +2

Query: 224 RARQQATYPSDPPSIWGRGTIPSQSRRLEQSRTVARRFAHNPRA 355
           RAR Q + P DPPS    G+   Q RR  +SR  A+  AH   A
Sbjct: 232 RARSQGS-PEDPPSQASPGSNKQQERR-RRSREEAQAKAHEAEA 273

>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 219  KRGLASKLPIHLILLASGEEARSPPNHGG*NSL 317
            +R L +K+P+   L ASG ++R+PP   G N L
Sbjct: 1447 RRNLPTKIPLPTTL-ASGSKSRNPPKTKGTNKL 1478

>ITA3_HUMAN (P26006) Integrin alpha-3 precursor (Galactoprotein B3) (GAPB3)|
           (VLA-3 alpha chain) (FRP-2) (CD49c antigen) [Contains:
           Integrin alpha-3 heavy chain; Integrin alpha-3 light
           chain]
          Length = 1066

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 353 PVDCERSDGQRSETVLTAVIGRGSCLFPRC 264
           PV    +   +SETVLT   GR  C++  C
Sbjct: 887 PVTLAAAKKAKSETVLTCATGRAHCVWLEC 916


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,307,319
Number of Sequences: 219361
Number of extensions: 1120408
Number of successful extensions: 2283
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)