ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch bran... 591 e-166
2emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II 196 4e-47
3gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme... 196 4e-47
4gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2... 196 4e-47
5gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme... 188 9e-45
6gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan 6-alph... 188 9e-45
7gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete... 42 1.3
8ref|NM_137701.2| Drosophila melanogaster CG4030-RA (CG4030), mRNA 42 1.3
9gb|AY061312.1| Drosophila melanogaster LD23155 full length cDNA 42 1.3
10gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, c... 42 1.3
11gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, co... 42 1.3
12gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61... 42 1.3
13gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205... 42 1.3
14emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chr... 42 1.3
15gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosom... 40 5.1
16gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome... 40 5.1
17gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence 40 5.1
18gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, compl... 40 5.1
19emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on ch... 40 5.1
20gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome ... 40 5.1
21emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 i... 40 5.1
22dbj|AK088955.1| Mus musculus 2 days neonate thymus thymic cells ... 40 5.1
23gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, comple... 40 5.1
24dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 40 5.1
25emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in... 40 5.1
26gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, comp... 40 5.1
27gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, comp... 40 5.1
28emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on ch... 40 5.1 
>gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
            mRNA, nuclear gene encoding plastid protein, complete cds
          Length = 2554

 Score =  591 bits (298), Expect = e-166
 Identities = 301/302 (99%)
 Strand = Plus / Minus

                                                                        
Query: 83   tgtccaagttgaagcgcacgggcaattattagtttatatgtacataaacaaccgggaatg 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 tgtccaagttgaagcgcacgggcaattattagtttatatgtacataaacaaccgggaatg 2469

                                                                        
Query: 143  tgagagataggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttct 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 tgagagataggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttct 2409

                                                                        
Query: 203  ttcgcaggtcacttgaaaacgagggctcgccagcaagctacctatccatctgatcctcct 262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 ttcgcaggtcacttgaaaacgagggctcgccagcaagctacctatccatctgatcctcct 2349

                                                                        
Query: 263  agcatctggggaagaggcacgatcccctcccaatcacggcggttagaacagtctcggacc 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 agcatctggggaagaggcacgatcccctcccaatcacggcggttagaacagtctcggacc 2289

                                                                        
Query: 323  gttgcccgtcgcttcgctcacaatccacgggctcactggagttctctttttgccttgtaa 382
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2288 gttgcccgtcgcttcgctcacaatccacgagctcactggagttctctttttgccttgtaa 2229

              
Query: 383  ca 384
            ||
Sbjct: 2228 ca 2227
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>emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II
          Length = 2970

 Score =  196 bits (99), Expect = 4e-47
 Identities = 147/163 (90%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 281
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2800 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2741

                                                                        
Query: 282  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 341
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2740 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2681

                                                       
Query: 342  acaatccacgggctcactggagttctctttttgccttgtaaca 384
            || ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 2680 acgatccacgagctctctggagttctctctttgccttgtaaca 2638



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/113 (87%), Gaps = 6/113 (5%)
 Strand = Plus / Minus

                                                                        
Query: 95   agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagatagga 154
            |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||
Sbjct: 2906 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 2848

                                                                 
Query: 155  tg-gttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 206
             | |   |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2847 ggagggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2799
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>gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme IIa variant mRNA, complete
            cds
          Length = 2726

 Score =  196 bits (99), Expect = 4e-47
 Identities = 147/163 (90%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 281
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2608 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2549

                                                                        
Query: 282  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 341
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2548 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2489

                                                       
Query: 342  acaatccacgggctcactggagttctctttttgccttgtaaca 384
            || ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 2488 acgatccacgagctctctggagttctctctttgccttgtaaca 2446



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/113 (87%), Gaps = 6/113 (5%)
 Strand = Plus / Minus

                                                                        
Query: 95   agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagatagga 154
            |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||
Sbjct: 2714 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 2656

                                                                 
Query: 155  tg-gttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 206
             | |   |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2655 ggagggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2607
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>gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2) mRNA, complete cds
          Length = 2970

 Score =  196 bits (99), Expect = 4e-47
 Identities = 147/163 (90%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 281
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2798 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2739

                                                                        
Query: 282  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 341
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2738 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2679

                                                       
Query: 342  acaatccacgggctcactggagttctctttttgccttgtaaca 384
            || ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 2678 acgatccacgagctctctggagttctctctttgccttgtaaca 2636



 Score =  109 bits (55), Expect = 7e-21
 Identities = 145/169 (85%), Gaps = 12/169 (7%)
 Strand = Plus / Minus

                                                                        
Query: 44   taggcaggtgaatcacgggctaacctatta---gaatatttat--gtccaagttgaagcg 98
            ||||||||| ||||||||| ||||||||||   ||||||||||  || || ||||| |||
Sbjct: 2959 taggcaggtaaatcacgggataacctattattagaatatttatatgttcacgttga-gcg 2901

                                                                        
Query: 99   cacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagataggatg-g 157
            |||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| | |
Sbjct: 2900 cacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagataggaggag 2842

                                                             
Query: 158  ttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 206
               |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2841 ggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2797
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>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds
          Length = 11475

 Score =  188 bits (95), Expect = 9e-45
 Identities = 146/163 (89%)
 Strand = Plus / Minus

                                                                         
Query: 222   cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 281
             |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 11353 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 11294

                                                                         
Query: 282   cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 341
             ||||||||||||| ||| |||| || || ||| ||||  |||||||||||||||||||||
Sbjct: 11293 cgatcccctcccagtcatggcgcttggagcagcctcgcgccgttgcccgtcgcttcgctc 11234

                                                        
Query: 342   acaatccacgggctcactggagttctctttttgccttgtaaca 384
             || ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 11233 acgatccacgagctctctggagttctctctttgccttgtaaca 11191



 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 8/115 (6%)
 Strand = Plus / Minus

                                                                         
Query: 95    agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagat---a 151
             |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||   |
Sbjct: 11461 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 11403

                                                                    
Query: 152   ggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 206
             ||| ||||||||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 11402 ggagggttcagtgcagcacaacaaa----cacccaggcccgtccattttctttcg 11352
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>gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan
            6-alpha-D-(1,4-alpha-D-glucanotransferase mRNA, complete
            cds
          Length = 2853

 Score =  188 bits (95), Expect = 9e-45
 Identities = 146/163 (89%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 281
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2680 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2621

                                                                        
Query: 282  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 341
            ||||||||||||| ||| |||| || || ||| ||||  |||||||||||||||||||||
Sbjct: 2620 cgatcccctcccagtcatggcgcttggagcagcctcgcgccgttgcccgtcgcttcgctc 2561

                                                       
Query: 342  acaatccacgggctcactggagttctctttttgccttgtaaca 384
            || ||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 2560 acgatccacgagctctctggagttctctctttgccttgtaaca 2518



 Score =  147 bits (74), Expect = 3e-32
 Identities = 138/156 (88%), Gaps = 10/156 (6%)
 Strand = Plus / Minus

                                                                        
Query: 56   tcacgggctaacctattagaatatttat--gtccaagttgaagcgcacgggcaattatta 113
            ||||||| ||||||||||||||||||||  || || ||||||||||||||||||||||||
Sbjct: 2829 tcacgggataacctattagaatatttatatgttcatgttgaagcgcacgggcaattatta 2770

                                                                        
Query: 114  gtttatatgtacataaacaaccgggaatgtgagagat---aggatggttcagtgcagcac 170
            | ||||||||||| |||||||||||||||||  ||||   |||| |||||||||||||||
Sbjct: 2769 g-ttatatgtacaaaaacaaccgggaatgtgcaagataggaggagggttcagtgcagcac 2711

                                                
Query: 171  tacaaaatgtcacccaggcccgtccattttctttcg 206
             |||||    ||||||||||||||||||||||||||
Sbjct: 2710 aacaaa----cacccaggcccgtccattttctttcg 2679
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>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence
          Length = 172393

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   ttattagtttatatgtacata 128
             |||||||||||||||||||||
Sbjct: 86061 ttattagtttatatgtacata 86041
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>ref|NM_137701.2| Drosophila melanogaster CG4030-RA (CG4030), mRNA
          Length = 2320

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 108 ttattagtttatatgtacata 128
           |||||||||||||||||||||
Sbjct: 52  ttattagtttatatgtacata 32
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>gb|AY061312.1| Drosophila melanogaster LD23155 full length cDNA
          Length = 2311

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 108 ttattagtttatatgtacata 128
           |||||||||||||||||||||
Sbjct: 27  ttattagtttatatgtacata 7
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>gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, complete sequence
          Length = 155537

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     agttctgctaaaatataggca 49
              |||||||||||||||||||||
Sbjct: 120783 agttctgctaaaatataggca 120763
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>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence
          Length = 120298

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     agttctgctaaaatataggca 49
              |||||||||||||||||||||
Sbjct: 101217 agttctgctaaaatataggca 101237
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>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the
            complete sequence
          Length = 305143

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  ttattagtttatatgtacata 128
            |||||||||||||||||||||
Sbjct: 2700 ttattagtttatatgtacata 2720
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>gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205)) DNA sequence, complete
             sequence
          Length = 80993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   ttattagtttatatgtacata 128
             |||||||||||||||||||||
Sbjct: 49971 ttattagtttatatgtacata 49951
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>emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chromosome X, complete
             sequence
          Length = 220669

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    tattcaccaaataaagttctg 35
             |||||||||||||||||||||
Sbjct: 48457 tattcaccaaataaagttctg 48477
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>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence
          Length = 198036

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    agtattcaccaaataaagtt 32
             ||||||||||||||||||||
Sbjct: 59413 agtattcaccaaataaagtt 59432
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>gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome 7, complete
            sequence
          Length = 190553

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  gtttatatgtacataaacaa 133
            ||||||||||||||||||||
Sbjct: 6326 gtttatatgtacataaacaa 6345
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>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence
          Length = 160031

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    gaatgtgagagataggatgg 157
              ||||||||||||||||||||
Sbjct: 102898 gaatgtgagagataggatgg 102917
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>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aatatttatgtccaagttga 94
             ||||||||||||||||||||
Sbjct: 62839 aatatttatgtccaagttga 62820
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>emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on chromosome 13q22.3-31.3,
             complete sequence
          Length = 147978

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aaataaagttctgctaaaat 42
             ||||||||||||||||||||
Sbjct: 25273 aaataaagttctgctaaaat 25254
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>gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome 7, complete sequence
          Length = 265770

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   gtttatatgtacataaacaa 133
             ||||||||||||||||||||
Sbjct: 60879 gtttatatgtacataaacaa 60860
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>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3,
             complete sequence
          Length = 103014

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    attagaatatttatgtccaagttg 93
             |||| |||||||||||||||||||
Sbjct: 44261 attaaaatatttatgtccaagttg 44238
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>dbj|AK088955.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430033K04
            product:unclassifiable, full insert sequence
          Length = 3339

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   aaataaagttctgctaaaat 42
            ||||||||||||||||||||
Sbjct: 3124 aaataaagttctgctaaaat 3143
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>gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, complete sequence
          Length = 217346

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     agttctgctaaaatataggc 48
              ||||||||||||||||||||
Sbjct: 118238 agttctgctaaaatataggc 118219
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     tagaatatttatgtccaagttgaa 95
              |||||||||| |||||||||||||
Sbjct: 266924 tagaatatttttgtccaagttgaa 266947
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>emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in linkage group 20,
             complete sequence
          Length = 42367

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   tcagtgcagcactacaaaat 178
             ||||||||||||||||||||
Sbjct: 28172 tcagtgcagcactacaaaat 28191
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>gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, complete sequence
          Length = 228551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   gctcactggagttctctttt 372
             ||||||||||||||||||||
Sbjct: 85355 gctcactggagttctctttt 85374
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>gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, complete sequence
          Length = 210575

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    gctcactggagttctctttt 372
              ||||||||||||||||||||
Sbjct: 191572 gctcactggagttctctttt 191591
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>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete
              sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aaataaagttctgctaaaat 42
              ||||||||||||||||||||
Sbjct: 130186 aaataaagttctgctaaaat 130205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,453,035
Number of Sequences: 3902068
Number of extensions: 3453035
Number of successful extensions: 60889
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60828
Number of HSP's gapped (non-prelim): 50
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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