>gb|AY104137.1| Zea mays PCO146094 mRNA sequence
          Length = 990

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 37  aaacaacaaatgttgaatgtacatttatacggaaacagc 75
           ||||||||||  ||||||||||||||||||| |||||||
Sbjct: 933 aaacaacaaactttgaatgtacatttatacgaaaacagc 895

>emb|AL807771.6| Mouse DNA sequence from clone RP23-141C15 on chromosome 4, complete
              sequence
          Length = 233077

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 258    tgaagcccatggagcaggagtact 281
              ||||||||||||||||||||||||
Sbjct: 142736 tgaagcccatggagcaggagtact 142759

>emb|CR655603.2|CNS0F4U1 Tetraodon nigroviridis full-length cDNA
          Length = 1524

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 21  aaatgttcagataataaaacaa 42
           ||||||||||||||||||||||
Sbjct: 407 aaatgttcagataataaaacaa 428

>gb|AC004052.1|AC004052 Homo sapiens chromosome 4 clone B209B10 map 4q25, complete sequence
          Length = 156490

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 29    agataataaaacaacaaatgtt 50
             ||||||||||||||||||||||
Sbjct: 39516 agataataaaacaacaaatgtt 39537

>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete
             sequence
          Length = 82909

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 30    gataataaaacaacaaatgttgaat 54
             |||||||||| ||||||||||||||
Sbjct: 71419 gataataaaaaaacaaatgttgaat 71443

>ref|XM_961052.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0770c) partial
            mRNA
          Length = 5421

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   gataataaaacaacaaatgtt 50
            |||||||||||||||||||||
Sbjct: 4684 gataataaaacaacaaatgtt 4704

>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete
             sequence
          Length = 159229

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 39    acaacaaatgttgaatgtacattta 63
             |||||||||||||||| ||||||||
Sbjct: 99749 acaacaaatgttgaatttacattta 99773

>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5
          Length = 348174

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     gataataaaacaacaaatgtt 50
              |||||||||||||||||||||
Sbjct: 313800 gataataaaacaacaaatgtt 313780

>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    caaatgttgaatgtacattta 63
             |||||||||||||||||||||
Sbjct: 86287 caaatgttgaatgtacattta 86307

>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    caaatgttgaatgtacattta 63
             |||||||||||||||||||||
Sbjct: 69814 caaatgttgaatgtacattta 69834

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     tgttcagctttcttgagcggc 162
               |||||||||||||||||||||
Sbjct: 2455857 tgttcagctttcttgagcggc 2455837

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 30       gataataaaacaacaaatgttgaat 54
                |||||||||| ||||||||||||||
Sbjct: 19219075 gataataaaaaaacaaatgttgaat 19219099

>gb|AC084666.1|CBRG47D14 Caenorhabditis briggsae cosmid G47D14, complete sequence
          Length = 37034

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    ataataaaacaacaaatgttg 51
             |||||||||||||||||||||
Sbjct: 15889 ataataaaacaacaaatgttg 15909

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 30       gataataaaacaacaaatgttgaat 54
                |||||||||| ||||||||||||||
Sbjct: 19230351 gataataaaaaaacaaatgttgaat 19230375

>ref|XM_462497.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G23232g)
           partial mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 ctgaacccaagagaagcttt 120
           ||||||||||||||||||||
Sbjct: 883 ctgaacccaagagaagcttt 902

>emb|CR381650.15| Zebrafish DNA sequence from clone CH211-129F24 in linkage group 7,
             complete sequence
          Length = 137625

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    taataaaacaacaaatgttg 51
             ||||||||||||||||||||
Sbjct: 33019 taataaaacaacaaatgttg 33038

>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 157107

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   aataaaacaacaaatgttga 52
            ||||||||||||||||||||
Sbjct: 1239 aataaaacaacaaatgttga 1258

>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     ctgaacccaagagaagcttt 120
               ||||||||||||||||||||
Sbjct: 1781287 ctgaacccaagagaagcttt 1781306

>gb|AC153523.7| Mus musculus 10 BAC RP23-463C2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 200141

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aaatgttcagataataaaac 40
             ||||||||||||||||||||
Sbjct: 31841 aaatgttcagataataaaac 31822

>emb|AJ556169.1|ACA556169 Aplysia californica mRNA for hemocyanin (hc gene)
          Length = 11468

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ataataaaacaacaaatgtt 50
             ||||||||||||||||||||
Sbjct: 10656 ataataaaacaacaaatgtt 10637

>gb|AC100779.2| Homo sapiens chromosome 18, clone RP11-761D8, complete sequence
          Length = 196261

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 97   ttttctgaacccaagagaagcttt 120
            |||||||| |||||||||||||||
Sbjct: 3543 ttttctgatcccaagagaagcttt 3520

>gb|AC107022.4| Homo sapiens 3 BAC RP11-417H23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116557

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   agagaagctttgaatacaac 129
             ||||||||||||||||||||
Sbjct: 83018 agagaagctttgaatacaac 83037

>gb|AC063944.25| Homo sapiens 3 BAC RP11-446H18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180389

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   agagaagctttgaatacaac 129
             ||||||||||||||||||||
Sbjct: 83080 agagaagctttgaatacaac 83099

>gb|AC091169.7| Homo sapiens chromosome 18, clone RP11-809A17, complete sequence
          Length = 163138

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     ttttctgaacccaagagaagcttt 120
              |||||||| |||||||||||||||
Sbjct: 161070 ttttctgatcccaagagaagcttt 161047

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     cttcggtcttcccgaggtgc 181
               ||||||||||||||||||||
Sbjct: 2777885 cttcggtcttcccgaggtgc 2777866

>gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 182817

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aaatgttcagataataaaac 40
             ||||||||||||||||||||
Sbjct: 53755 aaatgttcagataataaaac 53774

>emb|AL592183.10| Human DNA sequence from clone RP11-297D8 on chromosome 22, complete
             sequence
          Length = 179198

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    ataaaacaacaaatgttgaatgta 57
             |||||||| |||||||||||||||
Sbjct: 22944 ataaaacagcaaatgttgaatgta 22967

>emb|AL732360.12| Mouse DNA sequence from clone RP23-405B14 on chromosome X, complete
             sequence
          Length = 197398

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tagtttggtcatgttttctg 103
             ||||||||||||||||||||
Sbjct: 31764 tagtttggtcatgttttctg 31745

>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete
             sequence
          Length = 187043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tcatgttttctgaacccaag 111
             ||||||||||||||||||||
Sbjct: 44134 tcatgttttctgaacccaag 44115


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,205,339
Number of Sequences: 3902068
Number of extensions: 3205339
Number of successful extensions: 65953
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65865
Number of HSP's gapped (non-prelim): 88
length of query: 326
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 304
effective length of database: 17,147,199,772
effective search space: 5212748730688
effective search space used: 5212748730688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)