Clone Name | rbastl09g05 |
---|---|
Clone Library Name | barley_pub |
>CHE1_CAEEL (Q966L8) Transcription factor che-1 (Abnormal chemotaxis protein 1)| Length = 279 Score = 30.8 bits (68), Expect = 0.84 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +2 Query: 26 YLQCTQLVLHMRSETPQQQPH---NCSNIITTSFTNRRDLEKRMGSK-----ILFIKFHQ 181 + Q + LV H R+ T ++ P+ C T S T + L G K I +KF Q Sbjct: 209 FSQSSSLVTHRRTHTGER-PYPCAQCEKAFTDSSTLTKHLRTHTGHKPYVCSICMMKFTQ 267 Query: 182 ALNVHKLIEAHR 217 + N+H+ ++ H+ Sbjct: 268 SGNLHRHMKTHK 279
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +1 Query: 31 AVYTTSTTHEVGNTTTAASQLFEYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRG 210 A Y T E GNT ++ L + P+ GL++ + I S +K G Sbjct: 4559 AEYKVVLTDEDGNTADSSCAL-----TVKLPAKEPKIIKGLEDQVVSIGSPIKLEIETSG 4613 Query: 211 APKKVSWYQ 237 +PK V WY+ Sbjct: 4614 SPKTVKWYK 4622
>NELFE_DROVI (Q95ZE9) Negative elongation factor E| Length = 281 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +3 Query: 273 LHVPNNLGTKKHLIPPKYQRL 335 +H PNNL ++H++ KYQ+L Sbjct: 4 IHFPNNLTEEEHMLQAKYQKL 24
>CWC26_USTMA (Q4PI72) Pre-mRNA-splicing factor CWC26| Length = 339 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 124 PPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVSWYQYKAKL 252 P P+ K G + IP G + VDRG + ++++ KA+L Sbjct: 282 PSMPKYKGGWPPNRFNIPPGYRWDGVDRGNGYEKAFFERKAQL 324
>ACE_CHICK (Q10751) Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl| carboxypeptidase I) (Kininase II) (Fragment) Length = 1193 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = +1 Query: 46 STTHEVGNTTTAASQLFEYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVD 204 ST V N T AS +EYN NI + L S H I G++ Q D Sbjct: 556 STAEVVWNAYTEAS--WEYNTNITDHNKEVMLEKNLAMSKHTIEYGMRARQFD 606
>ZN496_HUMAN (Q96IT1) Zinc finger protein 496| Length = 587 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 47 VLHMRSETPQQQPHNCSNIITTSFTNRRDLEKRMGS 154 + H+RS Q++PH CS + F++ DL+ + S Sbjct: 422 IRHLRSRREQEKPHECS-VCGELFSDSEDLDGHLES 456
>CLD14_MOUSE (Q9Z0S3) Claudin-14| Length = 239 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = +1 Query: 181 GLKCTQVDRGAPKKVSWYQYKAKLRLNSPSNCTYQITWVQRNI*FLPSINASSIPAGWK 357 G+KCT+ +G P K ++ L L + C ++W ++ + + +P+G K Sbjct: 101 GMKCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDV--VQNFYNPLLPSGMK 157
>DPYL5_RAT (Q9JHU0) Dihydropyrimidinase-related protein 5 (DRP-5) (ULIP6| protein) Length = 564 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +1 Query: 97 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 228 E + P RP ++G LH+ L +Q+D PK+ S Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549
>DPYL5_MOUSE (Q9EQF6) Dihydropyrimidinase-related protein 5 (DRP-5) (Collapsin| response mediator protein 5) (CRMP-5) Length = 564 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +1 Query: 97 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 228 E + P RP ++G LH+ L +Q+D PK+ S Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549
>DPYL5_HUMAN (Q9BPU6) Dihydropyrimidinase-related protein 5 (DRP-5) (ULIP6| protein) (Collapsin response mediator protein 5) (CRMP-5) (CRMP3-associated molecule) (CRAM) Length = 564 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +1 Query: 97 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 228 E + P RP ++G LH+ L +Q+D PK+ S Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549
>CDGT_BACLI (P14014) Cyclomaltodextrin glucanotransferase precursor (EC| 2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase) Length = 718 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 34 VYTTSTTHEVGNTTTAASQLFEYNNNILHKPP 129 +Y T E+GN TT A+ + N ++H P Sbjct: 636 IYLTGNVSELGNWTTGAASIGPAFNQVIHAYP 667 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,228,235 Number of Sequences: 219361 Number of extensions: 1079964 Number of successful extensions: 2698 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2697 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)