>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 275      ggcgagcgagggatgagcgacggcttgggttccttgctcgattcatagggatggttctca 334
                |||||||||||||||||||| ||| || | ||||||||||  || ||||| |||||||| 
Sbjct: 27935778 ggcgagcgagggatgagcgatggcctgcggtccttgctcggctcgtaggggtggttctcg 27935837

                       
Query: 335      cggaact 341
                |||||||
Sbjct: 27935838 cggaact 27935844

>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0562A06
          Length = 154198

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                         
Query: 275   ggcgagcgagggatgagcgacggcttgggttccttgctcgattcatagggatggttctca 334
             |||||||||||||||||||| ||| || | ||||||||||  || ||||| |||||||| 
Sbjct: 13270 ggcgagcgagggatgagcgatggcctgcggtccttgctcggctcgtaggggtggttctcg 13329

                    
Query: 335   cggaact 341
             |||||||
Sbjct: 13330 cggaact 13336

>dbj|AK071334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090L01, full
            insert sequence
          Length = 3709

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  ggcgagcgagggatgagcgacggcttgggttccttgctcgattcatagggatggttctca 334
            |||||||||||||||||||| ||| || | ||||||||||  || ||||| |||||||| 
Sbjct: 3398 ggcgagcgagggatgagcgatggcctgcggtccttgctcggctcgtaggggtggttctcg 3339

                   
Query: 335  cggaact 341
            |||||||
Sbjct: 3338 cggaact 3332

>dbj|AK060581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H01, full
            insert sequence
          Length = 1784

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  ggcgagcgagggatgagcgacggcttgggttccttgctcgattcatagggatggttctca 334
            |||||||||||||||||||| ||| || | ||||||||||  || ||||| |||||||| 
Sbjct: 1478 ggcgagcgagggatgagcgatggcctgcggtccttgctcggctcgtaggggtggttctcg 1419

                   
Query: 335  cggaact 341
            |||||||
Sbjct: 1418 cggaact 1412

>gb|AC173289.2| Medicago truncatula chromosome 2 BAC clone mth2-33e9, complete sequence
          Length = 127190

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 233    aaaagaagtattatcattgtttctc 257
              |||||||||||||||||||||||||
Sbjct: 116413 aaaagaagtattatcattgtttctc 116437

>gb|AF272752.1|AF272752 Zea mays kinesin heavy chain (KIN4) mRNA, partial cds
          Length = 3385

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 315  attcatagggatggttctcacggaact 341
            ||||||| |||||||||||||||||||
Sbjct: 3092 attcatacggatggttctcacggaact 3066

>gb|BT018857.1| Zea mays clone EL01N0556F08.d mRNA sequence
          Length = 2117

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 316  ttcatagggatggttctcacggaact 341
            |||||| |||||||||||||||||||
Sbjct: 1902 ttcatacggatggttctcacggaact 1877

>gb|AF272755.1|AF272755 Zea mays kinesin heavy chain (KIN8) mRNA, partial cds
          Length = 3514

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 316  ttcatagggatggttctcacggaact 341
            |||||| |||||||||||||||||||
Sbjct: 3176 ttcatacggatggttctcacggaact 3151

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 173     cagcaaggacatcaaagccagcagc 197
               ||||||||||||||| |||||||||
Sbjct: 1389515 cagcaaggacatcaaggccagcagc 1389491

>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              7/17
          Length = 348813

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    agtattatcattgtttctcag 259
              |||||||||||||||||||||
Sbjct: 161975 agtattatcattgtttctcag 161995

>emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in linkage group 8,
             complete sequence
          Length = 170195

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ttacactgcacacagaaaag 237
             ||||||||||||||||||||
Sbjct: 96460 ttacactgcacacagaaaag 96441

>emb|Z19150.1|RNABSRECB R.norvegicus androgen receptor DNA-binding domain DNA sequence
          Length = 1720

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 actgcacacagaaaagaagt 241
           ||||||||||||||||||||
Sbjct: 285 actgcacacagaaaagaagt 304

>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2, complete
              sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aattttttacaagaatattc 90
              ||||||||||||||||||||
Sbjct: 120050 aattttttacaagaatattc 120069

>gb|AC036214.9| Homo sapiens chromosome 8, clone RP11-26J3, complete sequence
          Length = 160545

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    atacattctagcaagaatgcaaaa 134
              ||||||||||| ||||||||||||
Sbjct: 102314 atacattctagtaagaatgcaaaa 102291

>gb|AC018952.9| Homo sapiens chromosome 8, clone RP11-498N9, complete sequence
          Length = 180535

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   atacattctagcaagaatgcaaaa 134
             ||||||||||| ||||||||||||
Sbjct: 30566 atacattctagtaagaatgcaaaa 30589

>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence
          Length = 183666

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   gaaaagaagtattatcattg 251
             ||||||||||||||||||||
Sbjct: 96583 gaaaagaagtattatcattg 96564

>gb|AC003666.1|AC003666 Homo sapiens Xp22 BAC GS-551O19 (Genome Systems Human BAC library) and
             cosmids U199A7 and U209F2 (Lawrence Livermore X chromosome
             cosmid library) containing part of human chloride channel
             4 gene, complete sequence
          Length = 151750

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 171   cacagcaaggacatcaaagccagc 194
             |||||||||||||||||| |||||
Sbjct: 42917 cacagcaaggacatcaaaaccagc 42894

>emb|AM050329.1| Unidentified microorganism phagemid clone pBKR.34
          Length = 5700

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  aaaagaagtattatcattgt 252
            ||||||||||||||||||||
Sbjct: 3635 aaaagaagtattatcattgt 3654


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,021
Number of Sequences: 3902068
Number of extensions: 3110021
Number of successful extensions: 59314
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59264
Number of HSP's gapped (non-prelim): 50
length of query: 341
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 319
effective length of database: 17,147,199,772
effective search space: 5469956727268
effective search space used: 5469956727268
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)